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include a minimal build and test action
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WardDeb committed Feb 1, 2024
1 parent 77d8ca1 commit a833a33
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32 changes: 32 additions & 0 deletions .github/workflows/build.yml
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name: build

on:
push:

defaults:
run:
shell: bash -l {0}

jobs:
build:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: mamba-org/setup-micromamba@main
with:
environment-file: requirements.yaml
cache-downloads: true
environment-name: ultraheatmap
- name: build
run: |
micromamba activate ultraheatmap
pip install .
- name: addFeatureToMatrix
run: |
micromamba activate ultraheatmap
bash ultraheatmap/test/test_data/addFeatureToMatrix/addFeatureToMatrix.sh
- name: computeOrderedMatrix
run: |
micromamba activate ultraheatmap
bash ultraheatmap/test/test_data/computeOrderedMatrix/computeOrderedMatrix.sh

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