ci: quarto automatic render (#155)

skip-checks: true Co-authored-by: mcanouil <[email protected]>
mcanouil · Apr 1, 2024 · 0c04830 · 0c04830
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commit 0c04830
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diff --git a/_site/blog.html b/_site/blog.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.24">
+<meta name="generator" content="quarto-1.5.27">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -245,7 +245,7 @@ <h5 class="quarto-listing-category-title">Categories</h5><div class="quarto-list
 
 <div class="quarto-listing quarto-listing-container-default" id="listing-listing">
 <div class="list quarto-listing-default">
-<div class="quarto-post image-right" data-index="0" data-categories="Quarto,Q&amp;A,JavaScript,theme,dark mode,light mode" data-listing-date-sort="1685404800000" data-listing-file-modified-sort="1710090069590" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="392">
+<div class="quarto-post image-right" data-index="0" data-categories="Quarto,Q&amp;A,JavaScript,theme,dark mode,light mode" data-listing-date-sort="1685404800000" data-listing-file-modified-sort="1711972853307" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="392">
 <div class="thumbnail">
 <p><a href="./posts/2023-05-30-quarto-light-dark/index.html" class="no-external"></a></p><a href="./posts/2023-05-30-quarto-light-dark/index.html" class="no-external">
 <p><img src="./posts/2023-05-30-quarto-light-dark/featured.gif" class="thumbnail-image" alt="Animated GIF showing a ggplot2 figure switching from light to dark on theme toggle switch.
@@ -294,7 +294,7 @@ <h3 class="no-anchor listing-title">
 </a>
 </div>
 </div>
-<div class="quarto-post image-right" data-index="1" data-categories="Quarto,Q&amp;A,Docker" data-listing-date-sort="1683417600000" data-listing-file-modified-sort="1710090069578" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="10" data-listing-word-count-sort="1860">
+<div class="quarto-post image-right" data-index="1" data-categories="Quarto,Q&amp;A,Docker" data-listing-date-sort="1683417600000" data-listing-file-modified-sort="1711972853295" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="10" data-listing-word-count-sort="1860">
 <div class="thumbnail">
 <p><a href="./posts/2023-05-07-quarto-docker/index.html" class="no-external"></a></p><a href="./posts/2023-05-07-quarto-docker/index.html" class="no-external">
 <p><img src="./posts/2023-05-07-quarto-docker/featured.png" class="thumbnail-image" alt="Docker logo with a whale and containers on top of it, and Quarto logo with text inside the whale.
@@ -334,7 +334,7 @@ <h3 class="no-anchor listing-title">
 </a>
 </div>
 </div>
-<div class="quarto-post image-right" data-index="2" data-categories="Quarto,Q&amp;A,MathJax,LaTeX" data-listing-date-sort="1678579200000" data-listing-file-modified-sort="1710090069578" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="212">
+<div class="quarto-post image-right" data-index="2" data-categories="Quarto,Q&amp;A,MathJax,LaTeX" data-listing-date-sort="1678579200000" data-listing-file-modified-sort="1711972853295" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="212">
 <div class="thumbnail">
 <p><a href="./posts/2023-03-12-quarto-mathjax-packages/index.html" class="no-external"></a></p><a href="./posts/2023-03-12-quarto-mathjax-packages/index.html" class="no-external">
 <p><img src="./posts/2023-03-12-quarto-mathjax-packages/featured.png" class="thumbnail-image" alt="Quarto logo and text in the center of the image. Below, MathJax logo and text.
@@ -377,7 +377,7 @@ <h3 class="no-anchor listing-title">
 </a>
 </div>
 </div>
-<div class="quarto-post image-right" data-index="3" data-categories="Quarto,Q&amp;A,R,knitr" data-listing-date-sort="1677974400000" data-listing-file-modified-sort="1710090069578" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="310">
+<div class="quarto-post image-right" data-index="3" data-categories="Quarto,Q&amp;A,R,knitr" data-listing-date-sort="1677974400000" data-listing-file-modified-sort="1711972853295" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="2" data-listing-word-count-sort="310">
 <div class="thumbnail">
 <p><a href="./posts/2023-03-05-quarto-auto-table-crossref/index.html" class="no-external"></a></p><a href="./posts/2023-03-05-quarto-auto-table-crossref/index.html" class="no-external">
 <p><img src="./posts/2023-03-05-quarto-auto-table-crossref/featured.png" class="thumbnail-image" alt="Screenshot of an html rendered by Quarto. it starts with a sentence saying below are several tables by species of penguins, followed by an item list showing the species and their respective cross-reference to the tables.
@@ -421,7 +421,7 @@ <h3 class="no-anchor listing-title">
 </a>
 </div>
 </div>
-<div class="quarto-post image-right" data-index="4" data-categories="R,blogdown,rmarkdown,HUGO,Website" data-listing-date-sort="1620259200000" data-listing-file-modified-sort="1710090069574" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="16" data-listing-word-count-sort="3098">
+<div class="quarto-post image-right" data-index="4" data-categories="R,blogdown,rmarkdown,HUGO,Website" data-listing-date-sort="1620259200000" data-listing-file-modified-sort="1711972853295" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="16" data-listing-word-count-sort="3098">
 <div class="thumbnail">
 <p><a href="./posts/2021-05-06-floating-toc-in-blogdown/index.html" class="no-external"></a></p><a href="./posts/2021-05-06-floating-toc-in-blogdown/index.html" class="no-external">
 <p><img src="./posts/2021-05-06-floating-toc-in-blogdown/featured.png" class="thumbnail-image" alt="Screenshot of the `blogdown` blog post &amp;#039;Add a Floating Table of Contents in `blogdown`' showing a table of content on the right.
@@ -467,7 +467,7 @@ <h3 class="no-anchor listing-title">
 </a>
 </div>
 </div>
-<div class="quarto-post image-right" data-index="5" data-categories="R,Visualisation,ggplot2,gganimate,Fun" data-listing-date-sort="1588723200000" data-listing-file-modified-sort="1710090069554" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="29" data-listing-word-count-sort="5627">
+<div class="quarto-post image-right" data-index="5" data-categories="R,Visualisation,ggplot2,gganimate,Fun" data-listing-date-sort="1588723200000" data-listing-file-modified-sort="1711972853275" data-listing-date-modified-sort="NaN" data-listing-reading-time-sort="29" data-listing-word-count-sort="5627">
 <div class="thumbnail">
 <p><a href="./posts/2020-05-06-ggpacman/index.html" class="no-external"></a></p><a href="./posts/2020-05-06-ggpacman/index.html" class="no-external">
 <p><img src="./posts/2020-05-06-ggpacman/featured.png" class="thumbnail-image" alt="`ggpacman` hexagonal logo representing a red ghost from the game Pac-Man on a black background with a blue border and `ggpacman` written in yellow below the ghost.
@@ -553,18 +553,7 @@ <h3 class="no-anchor listing-title">
     }
     return false;
   }
-  const clipboard = new window.ClipboardJS('.code-copy-button', {
-    text: function(trigger) {
-      const codeEl = trigger.previousElementSibling.cloneNode(true);
-      for (const childEl of codeEl.children) {
-        if (isCodeAnnotation(childEl)) {
-          childEl.remove();
-        }
-      }
-      return codeEl.innerText;
-    }
-  });
-  clipboard.on('success', function(e) {
+  const onCopySuccess = function(e) {
     // button target
     const button = e.trigger;
     // don't keep focus
@@ -596,7 +585,29 @@ <h3 class="no-anchor listing-title">
     }, 1000);
     // clear code selection
     e.clearSelection();
+  }
+  const getTextToCopy = function(trigger) {
+      const codeEl = trigger.previousElementSibling.cloneNode(true);
+      for (const childEl of codeEl.children) {
+        if (isCodeAnnotation(childEl)) {
+          childEl.remove();
+        }
+      }
+      return codeEl.innerText;
+  }
+  const clipboard = new window.ClipboardJS('.code-copy-button:not([data-in-quarto-modal])', {
+    text: getTextToCopy
   });
+  clipboard.on('success', onCopySuccess);
+  if (window.document.getElementById('quarto-embedded-source-code-modal')) {
+    // For code content inside modals, clipBoardJS needs to be initialized with a container option
+    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
+    const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
+      text: getTextToCopy,
+      container: window.document.getElementById('quarto-embedded-source-code-modal')
+    });
+    clipboardModal.on('success', onCopySuccess);
+  }
   const viewSource = window.document.getElementById('quarto-view-source') ||
                      window.document.getElementById('quarto-code-tools-source');
   if (viewSource) {

diff --git a/_site/index.html b/_site/index.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.24">
+<meta name="generator" content="quarto-1.5.27">
 
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 
@@ -268,18 +268,7 @@ <h2 data-anchor-id="interests">Interests</h2>
     }
     return false;
   }
-  const clipboard = new window.ClipboardJS('.code-copy-button', {
-    text: function(trigger) {
-      const codeEl = trigger.previousElementSibling.cloneNode(true);
-      for (const childEl of codeEl.children) {
-        if (isCodeAnnotation(childEl)) {
-          childEl.remove();
-        }
-      }
-      return codeEl.innerText;
-    }
-  });
-  clipboard.on('success', function(e) {
+  const onCopySuccess = function(e) {
     // button target
     const button = e.trigger;
     // don't keep focus
@@ -311,7 +300,29 @@ <h2 data-anchor-id="interests">Interests</h2>
     }, 1000);
     // clear code selection
     e.clearSelection();
+  }
+  const getTextToCopy = function(trigger) {
+      const codeEl = trigger.previousElementSibling.cloneNode(true);
+      for (const childEl of codeEl.children) {
+        if (isCodeAnnotation(childEl)) {
+          childEl.remove();
+        }
+      }
+      return codeEl.innerText;
+  }
+  const clipboard = new window.ClipboardJS('.code-copy-button:not([data-in-quarto-modal])', {
+    text: getTextToCopy
   });
+  clipboard.on('success', onCopySuccess);
+  if (window.document.getElementById('quarto-embedded-source-code-modal')) {
+    // For code content inside modals, clipBoardJS needs to be initialized with a container option
+    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
+    const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
+      text: getTextToCopy,
+      container: window.document.getElementById('quarto-embedded-source-code-modal')
+    });
+    clipboardModal.on('success', onCopySuccess);
+  }
   const viewSource = window.document.getElementById('quarto-view-source') ||
                      window.document.getElementById('quarto-code-tools-source');
   if (viewSource) {

diff --git a/_site/listings.json b/_site/listings.json
@@ -1,11 +1,14 @@
 [
   {
-    "listing": "/projects.html",
-    "items": []
-  },
-  {
-    "listing": "/publications.html",
-    "items": []
+    "listing": "/blog.html",
+    "items": [
+      "/posts/2023-05-30-quarto-light-dark/index.html",
+      "/posts/2023-05-07-quarto-docker/index.html",
+      "/posts/2023-03-12-quarto-mathjax-packages/index.html",
+      "/posts/2023-03-05-quarto-auto-table-crossref/index.html",
+      "/posts/2021-05-06-floating-toc-in-blogdown/index.html",
+      "/posts/2020-05-06-ggpacman/index.html"
+    ]
   },
   {
     "listing": "/talks.html",
@@ -20,14 +23,11 @@
     ]
   },
   {
-    "listing": "/blog.html",
-    "items": [
-      "/posts/2023-05-30-quarto-light-dark/index.html",
-      "/posts/2023-05-07-quarto-docker/index.html",
-      "/posts/2023-03-12-quarto-mathjax-packages/index.html",
-      "/posts/2023-03-05-quarto-auto-table-crossref/index.html",
-      "/posts/2021-05-06-floating-toc-in-blogdown/index.html",
-      "/posts/2020-05-06-ggpacman/index.html"
-    ]
+    "listing": "/publications.html",
+    "items": []
+  },
+  {
+    "listing": "/projects.html",
+    "items": []
   }
 ]
diff --git a/_site/posts/2020-05-06-ggpacman/index.html b/_site/posts/2020-05-06-ggpacman/index.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.24">
+<meta name="generator" content="quarto-1.5.27">
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 <meta name="author" content="Mickaël CANOUIL">
 <meta name="description" content="The story of ggpacman. Or how to build a useless but fun R package to make a GIF of the game Pac-Man.">
@@ -1581,18 +1581,7 @@ <h1 class="title">A <code>ggplot2</code> and <code>gganimate</code> Version of P
     }
     return false;
   }
-  const clipboard = new window.ClipboardJS('.code-copy-button', {
-    text: function(trigger) {
-      const codeEl = trigger.previousElementSibling.cloneNode(true);
-      for (const childEl of codeEl.children) {
-        if (isCodeAnnotation(childEl)) {
-          childEl.remove();
-        }
-      }
-      return codeEl.innerText;
-    }
-  });
-  clipboard.on('success', function(e) {
+  const onCopySuccess = function(e) {
     // button target
     const button = e.trigger;
     // don't keep focus
@@ -1624,7 +1613,29 @@ <h1 class="title">A <code>ggplot2</code> and <code>gganimate</code> Version of P
     }, 1000);
     // clear code selection
     e.clearSelection();
+  }
+  const getTextToCopy = function(trigger) {
+      const codeEl = trigger.previousElementSibling.cloneNode(true);
+      for (const childEl of codeEl.children) {
+        if (isCodeAnnotation(childEl)) {
+          childEl.remove();
+        }
+      }
+      return codeEl.innerText;
+  }
+  const clipboard = new window.ClipboardJS('.code-copy-button:not([data-in-quarto-modal])', {
+    text: getTextToCopy
   });
+  clipboard.on('success', onCopySuccess);
+  if (window.document.getElementById('quarto-embedded-source-code-modal')) {
+    // For code content inside modals, clipBoardJS needs to be initialized with a container option
+    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
+    const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
+      text: getTextToCopy,
+      container: window.document.getElementById('quarto-embedded-source-code-modal')
+    });
+    clipboardModal.on('success', onCopySuccess);
+  }
   const viewSource = window.document.getElementById('quarto-view-source') ||
                      window.document.getElementById('quarto-code-tools-source');
   if (viewSource) {
@@ -2032,7 +2043,7 @@ <h1 class="title">A <code>ggplot2</code> and <code>gganimate</code> Version of P
     "$1<sup style='font-size:0.5em;font-style:italic;'>$2</sup>"
   );
 });
-</script><script>var lightboxQuarto = GLightbox({"loop":false,"closeEffect":"zoom","descPosition":"bottom","openEffect":"zoom","selector":".lightbox"});
+</script><script>var lightboxQuarto = GLightbox({"openEffect":"zoom","closeEffect":"zoom","descPosition":"bottom","loop":false,"selector":".lightbox"});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;

diff --git a/_site/posts/2021-05-06-floating-toc-in-blogdown/index.html b/_site/posts/2021-05-06-floating-toc-in-blogdown/index.html
@@ -2,7 +2,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en"><head>
 <meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
 <meta charset="utf-8">
-<meta name="generator" content="quarto-1.5.24">
+<meta name="generator" content="quarto-1.5.27">
 <meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">
 <meta name="author" content="Mickaël CANOUIL">
 <meta name="description" content="How to have a table of contents (TOC) on either the left or the right side of a post? I have an answer!">
@@ -687,18 +687,7 @@ <h1 class="title">Add a Floating Table of Contents in <code>blogdown</code>
     }
     return false;
   }
-  const clipboard = new window.ClipboardJS('.code-copy-button', {
-    text: function(trigger) {
-      const codeEl = trigger.previousElementSibling.cloneNode(true);
-      for (const childEl of codeEl.children) {
-        if (isCodeAnnotation(childEl)) {
-          childEl.remove();
-        }
-      }
-      return codeEl.innerText;
-    }
-  });
-  clipboard.on('success', function(e) {
+  const onCopySuccess = function(e) {
     // button target
     const button = e.trigger;
     // don't keep focus
@@ -730,7 +719,29 @@ <h1 class="title">Add a Floating Table of Contents in <code>blogdown</code>
     }, 1000);
     // clear code selection
     e.clearSelection();
+  }
+  const getTextToCopy = function(trigger) {
+      const codeEl = trigger.previousElementSibling.cloneNode(true);
+      for (const childEl of codeEl.children) {
+        if (isCodeAnnotation(childEl)) {
+          childEl.remove();
+        }
+      }
+      return codeEl.innerText;
+  }
+  const clipboard = new window.ClipboardJS('.code-copy-button:not([data-in-quarto-modal])', {
+    text: getTextToCopy
   });
+  clipboard.on('success', onCopySuccess);
+  if (window.document.getElementById('quarto-embedded-source-code-modal')) {
+    // For code content inside modals, clipBoardJS needs to be initialized with a container option
+    // TODO: Check when it could be a function (https://github.com/zenorocha/clipboard.js/issues/860)
+    const clipboardModal = new window.ClipboardJS('.code-copy-button[data-in-quarto-modal]', {
+      text: getTextToCopy,
+      container: window.document.getElementById('quarto-embedded-source-code-modal')
+    });
+    clipboardModal.on('success', onCopySuccess);
+  }
   const viewSource = window.document.getElementById('quarto-view-source') ||
                      window.document.getElementById('quarto-code-tools-source');
   if (viewSource) {
@@ -1138,7 +1149,7 @@ <h1 class="title">Add a Floating Table of Contents in <code>blogdown</code>
     "$1<sup style='font-size:0.5em;font-style:italic;'>$2</sup>"
   );
 });
-</script><script>var lightboxQuarto = GLightbox({"closeEffect":"zoom","selector":".lightbox","loop":false,"openEffect":"zoom","descPosition":"bottom"});
+</script><script>var lightboxQuarto = GLightbox({"descPosition":"bottom","openEffect":"zoom","selector":".lightbox","closeEffect":"zoom","loop":false});
 window.onload = () => {
   lightboxQuarto.on('slide_before_load', (data) => {
     const { slideIndex, slideNode, slideConfig, player, trigger } = data;