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Fixes issue #222: Declares all deprecated classes to be subclasses of…
… 'ObsoleteClass'; and creates file that preserves original class hierarchy for deprecated classes.
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@@ -46,3 +46,6 @@ site | |
| pull-request.md | ||
| omrse/catalog-v001.xml | ||
| omrse/language/catalog-v001.xml | ||
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| .idea/ | ||
| *.py | ||
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
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| @@ -0,0 +1,359 @@ | ||
| <?xml version="1.0"?> | ||
| <rdf:RDF xmlns="http://www.w3.org/2002/07/owl#" | ||
| xml:base="http://www.w3.org/2002/07/owl" | ||
| xmlns:obo="http://purl.obolibrary.org/obo/" | ||
| xmlns:owl="http://www.w3.org/2002/07/owl#" | ||
| xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" | ||
| xmlns:xml="http://www.w3.org/XML/1998/namespace" | ||
| xmlns:xsd="http://www.w3.org/2001/XMLSchema#" | ||
| xmlns:rdfs="http://www.w3.org/2000/01/rdf-schema#"> | ||
| <Ontology/> | ||
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| <!-- | ||
| /////////////////////////////////////////////////////////////////////////////////////// | ||
| // | ||
| // Annotation properties | ||
| // | ||
| /////////////////////////////////////////////////////////////////////////////////////// | ||
| --> | ||
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| <!-- http://purl.obolibrary.org/obo/RO_0000057 --> | ||
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| <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0000057"> | ||
| <rdfs:label xml:lang="en">has participant</rdfs:label> | ||
| </AnnotationProperty> | ||
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| <!-- http://purl.obolibrary.org/obo/RO_0002218 --> | ||
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| <AnnotationProperty rdf:about="http://purl.obolibrary.org/obo/RO_0002218"> | ||
| <rdfs:label xml:lang="en">has active participant</rdfs:label> | ||
| <rdfs:subPropertyOf rdf:resource="http://purl.obolibrary.org/obo/RO_0000057"/> | ||
| </AnnotationProperty> | ||
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| <!-- | ||
| /////////////////////////////////////////////////////////////////////////////////////// | ||
| // | ||
| // Classes | ||
| // | ||
| /////////////////////////////////////////////////////////////////////////////////////// | ||
| --> | ||
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| <!-- http://purl.obolibrary.org/obo/BFO_0000040 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/BFO_0000040"> | ||
| <rdfs:label xml:lang="en">material entity</rdfs:label> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/IAO_0021003 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/IAO_0021003"> | ||
| <rdfs:label xml:lang="en">social act</rdfs:label> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000001 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000001"> | ||
| <rdfs:label xml:lang="en">human social role</rdfs:label> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000083 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000083"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000100"/> | ||
| <rdfs:label xml:lang="en">obsolete OMB ethnic identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000085 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000085"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000001"/> | ||
| <rdfs:label xml:lang="en">obsolete socio-legal human social role</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000098 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000098"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000132"/> | ||
| <rdfs:label xml:lang="en">obsolete racial identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000100 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000100"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000132"/> | ||
| <rdfs:label xml:lang="en">obsolete ethnic identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000127 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000127"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000083"/> | ||
| <rdfs:label xml:lang="en">obsolete hispanic or latino identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000128 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000128"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000083"/> | ||
| <rdfs:label xml:lang="en">obsolete not hispanic or latino identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000132 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000132"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000179"/> | ||
| <rdfs:label xml:lang="en">obsolete identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000133 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000133"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000132"/> | ||
| <rdfs:label xml:lang="en">obsolete gender identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000138 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000138"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000133"/> | ||
| <rdfs:label xml:lang="en">obsolete female gender identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000141 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000141"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000133"/> | ||
| <rdfs:label xml:lang="en">obsolete male gender identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000145 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000145"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000132"/> | ||
| <rdfs:label xml:lang="en">obsolete self-identity data item</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000162 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000162"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/IAO_0021003"/> | ||
| <rdfs:label xml:lang="en">obsolete medical advice</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000168 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000168"> | ||
| <rdfs:label xml:lang="en">obsolete questions asking process</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000173 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000173"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/BFO_0000040"/> | ||
| <rdfs:label xml:lang="en">obsolete material information bearer of question text plus answer set</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000176 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000176"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000168"/> | ||
| <rdfs:label xml:lang="en">obsolete identity question asking process</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000177 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000177"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000176"/> | ||
| <rdfs:label xml:lang="en">obsolete ethnic identity question asking process</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000178 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000178"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000176"/> | ||
| <rdfs:label xml:lang="en">obsolete race identity question asking process</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000179 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000179"> | ||
| <rdfs:label xml:lang="en">answer to identity question</rdfs:label> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000180 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000180"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000185"/> | ||
| <rdfs:label xml:lang="en">obsolete American Indian or Alaska Native identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000181 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000181"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000185"/> | ||
| <rdfs:label xml:lang="en">obsolete Asian identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000182 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000182"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000185"/> | ||
| <rdfs:label xml:lang="en">obsolete black or African American identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000183 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000183"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000185"/> | ||
| <rdfs:label xml:lang="en">obsolete Native Hawaiian or other Pacific Islander identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000184 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000184"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000185"/> | ||
| <rdfs:label xml:lang="en">obsolete white identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000185 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000185"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000098"/> | ||
| <rdfs:label xml:lang="en">obsolete OMB racial identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000192 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000192"> | ||
| <rdfs:label xml:lang="en">obsolete communication</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000196 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000196"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000192"/> | ||
| <rdfs:label xml:lang="en">obsolete expression of preferred language</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- http://purl.obolibrary.org/obo/OMRSE_00000507 --> | ||
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| <Class rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000507"> | ||
| <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/OMRSE_00000133"/> | ||
| <rdfs:label xml:lang="en">obsolete non-binary gender identity datum</rdfs:label> | ||
| <deprecated rdf:datatype="http://www.w3.org/2001/XMLSchema#boolean">true</deprecated> | ||
| </Class> | ||
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| <!-- | ||
| /////////////////////////////////////////////////////////////////////////////////////// | ||
| // | ||
| // Annotations | ||
| // | ||
| /////////////////////////////////////////////////////////////////////////////////////// | ||
| --> | ||
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| <rdf:Description rdf:about="http://purl.obolibrary.org/obo/OMRSE_00000020"> | ||
| <rdfs:label>is-aggregate-of</rdfs:label> | ||
| </rdf:Description> | ||
| </rdf:RDF> | ||
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| <!-- Generated by the OWL API (version 4.5.26.2023-07-17T20:34:13Z) https://github.com/owlcs/owlapi --> | ||
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