SUMMARY += HMMs! Yay!

Apart from some minor bugs that are fixed,

• @ozcanesen changed the state version number, so say goodbye to your old state files. Yes, you heard that right. But with this new design, state files are going to be extremely re-usable regardless of adding or removing layers in the interactive interface through parameters such as --additional-metadata or --split-hmm-layers.
• We now have DNA sequences for open reading frames reported in the functions matrix in the summary. Summary is just lovely. I keep summarizing stuff.

We are getting there!