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Minor bug fixes, and a new program: anvi-get-short-reads-from-bam
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@meren meren released this 14 Aug 20:29
· 18197 commits to master since this release
v1.0.1
87347f6

Besides a bunch of minor fixes (i.e., 90e4400, 8da7de0, 87347f6), we have two major changes:

  • Anvi'o now has a new program, anvi-get-short-reads-from-bam, that reports all short reads from a BAM file, or from multiple BAM files, for a given bin. More information is available under issue id #173.
  • There is no more version dependency for SciPy, which makes pip installation more straightforward.

(Please don't install the new version using the following archives. Instead, either use pip to install the new version, or download the latest source distribution from https://pypi.python.org/pypi/anvio).

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