Update workflow versions (#237)

* updated workflow versions * added new requirements * Update .github/workflows/cleanup.yml Co-authored-by: Saurabh Mogre <[email protected]> * Update analyze.yml --------- Co-authored-by: Megan Riel-Mehan <[email protected]> Co-authored-by: Saurabh Mogre <[email protected]>
mesoscope · Mar 19, 2024 · e69cfcc · e69cfcc
1 parent bde01cb
commit e69cfcc
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Showing 4 changed files with 9 additions and 8 deletions.
diff --git a/.github/workflows/analyze.yml b/.github/workflows/analyze.yml
@@ -14,9 +14,9 @@ jobs:
                 python-version: [3.9]
                 os: [ubuntu-latest]
         steps:
-            - uses: actions/checkout@v3
+            - uses: actions/checkout@v4
             - name: Set up Python ${{ matrix.python-version }}
-              uses: actions/setup-python@v4
+              uses: actions/setup-python@v5
               with:
                   python-version: ${{ matrix.python-version }}
             - name: Install Dependencies
@@ -41,9 +41,9 @@ jobs:
         runs-on: ubuntu-latest
         needs: [Analyze]
         steps:
-            - uses: actions/checkout@v3
+            - uses: actions/checkout@v4
             - name: Configure AWS credentials
-              uses: aws-actions/configure-aws-credentials@v1-node16
+              uses: aws-actions/configure-aws-credentials@v4
               with:
                   aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
                   aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}

diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml
@@ -48,9 +48,9 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-    - uses: actions/checkout@v1
+    - uses: actions/checkout@v4
     - name: Set up Python
-      uses: actions/setup-python@v1
+      uses: actions/setup-python@v5
       with:
         python-version: 3.9
     - name: Install Dependencies

diff --git a/.github/workflows/cleanup.yml b/.github/workflows/cleanup.yml
@@ -9,9 +9,9 @@ jobs:
   cleanup:
     runs-on: ubuntu-latest
     steps:
-    - uses: actions/checkout@v3
+    - uses: actions/checkout@v4
     - name: Configure AWS credentials
-      uses: aws-actions/configure-aws-credentials@v1-node16
+      uses: aws-actions/configure-aws-credentials@v4
       with:
         aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
         aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}

diff --git a/setup.py b/setup.py
@@ -28,6 +28,7 @@
     "seaborn>=0.12.1",
     "aicsimageio>=4.10.0",
     "pandas>=1.2.4",
+    "mdutils>=1.4.0",
 ]
 
 dev_requirements = [