feat: CRQ-059 Wikipedia Wikidata Extractor Integration

[jmikedupont2]

User description

This PR integrates the Wikipedia Wikidata extractor functionality.

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PR Type

Enhancement

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Description

• Implements comprehensive Wikipedia and Wikidata extraction functionality with caching support
• Adds extensive CRQ (Change Request) analysis tools including parsers, word analyzers, and state recognizers
• Creates MediaWiki template introspection and code generation capabilities
• Develops multiple analysis tools for agent communications, web corpus building, and URL processing
• Integrates GitHub PR analysis and automation scripts for CodeRabbitAI interactions
• Adds n-gram analysis, hierarchical text decomposition, and word classification systems
• Provides build automation for Wikipedia template code generation
• Includes comprehensive test suites for integration testing
• Adds extensive documentation and PR analysis data

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Diagram Walkthrough

flowchart LR
  A["Wikipedia Articles"] --> B["Wikipedia Parser"]
  C["Wikidata Entities"] --> D["Wikidata Client"]
  B --> E["Cache System"]
  D --> E
  E --> F["Data Structures"]
  
  G["CRQ Documents"] --> H["CRQ Parser"]
  H --> I["State Recognizer"]
  H --> J["Word Analyzer"]
  
  K["MediaWiki Templates"] --> L["Template Introspector"]
  L --> M["Code Generator"]
  M --> N["Generated Functions"]
  
  O["GitHub PRs"] --> P["PR Analysis Tools"]
  P --> Q["Communication Analysis"]
  Q --> R["Agent Response Analyzer"]

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File Walkthrough

	Relevant files
Enhancement	47 files crq_parser.rs CRQ Parser with State Machine and Communication Analysis  tools/crq_table_generator/src/crq_parser.rs • Adds comprehensive CRQ parsing functionality with state machine logic • Implements NextStep enum with various review and development states • Includes communication analysis for CoderabbitAI interactions • Provides n-gram text analysis and token extraction capabilities +265/-0  main.rs CRQ Word Analyzer Tool with Multiple Analysis Modes            tools/crq_word_analyzer/src/main.rs • Creates word analysis tool for CRQ documents with multiple analysis modes • Implements sequential response analysis and individual response classification • Adds categorized word counting and n-gram extraction functionality • Integrates with CRQ parser for next step determination +287/-0  crq_parser.rs Extended CRQ Parser with Enhanced N-gram Analysis                tools/crq_word_analyzer/src/crq_parser.rs • Duplicates CRQ parser functionality with extended n-gram lengths • Adds communication analysis for CoderabbitAI responses • Implements phase-based state classification system • Includes token extraction and n-gram matching capabilities +253/-0  main.rs CRQ Table Generator with GitHub Integration                            tools/crq_table_generator/src/main.rs • Creates CRQ table generator with PR mapping functionality • Implements command generation for GitHub PR comments • Adds detailed reporting with communication analysis results • Provides script output with executable permissions +189/-0  main.rs Agent Communication Response Analyzer Tool                              tools/agent_comms_analysis/response_analyzer/src/main.rs • Implements response analyzer for agent communication logs • Adds file organization by author functionality • Provides comment metadata parsing and analysis • Includes repeated phrase detection and speaker type classification +195/-0  lib.rs MediaWiki Template Introspector Core Library                          wikimedia-template-introspector-core/src/lib.rs • Adds MediaWiki template parsing and Rust code generation • Implements template invocation parsing with parameter handling • Provides WikiProject crate content generation functionality • Includes comprehensive test suite for template parsing +167/-0  wikidata_client.rs Wikidata Client with Caching and Entity Fetching                  wikipedia_extractor/src/wikidata_client.rs • Implements Wikidata entity fetching with caching support • Adds comprehensive data type handling for Wikidata claims • Provides both Wikipedia title and Wikidata ID lookup methods • Includes error handling and cache management +130/-0  parser_codegen.rs Template Parser with Code Generation Capabilities                wikimedia-template-introspector/src/parser_codegen.rs • Creates template parser with Rust function code generation • Implements regex-based template invocation parsing • Adds parameter handling for both named and positional parameters • Includes test suite with regex validation +126/-0  main.rs Web Spider Corpus Builder Tool                                                      tools/web_spider_corpus_builder/src/main.rs • Implements web spider for corpus building from markdown files • Adds URL extraction from markdown and plain text files • Provides content type handling for HTML and PDF files • Includes rate limiting and sanitized filename generation +108/-0  ngram_reporter.rs Hierarchical N-gram Analysis Reporter                                        src/bin/ngram_reporter.rs • Creates n-gram analysis reporter for hierarchical text analysis • Implements categorized output based on occurrence counts • Adds file-based reporting with category-specific outputs • Integrates with hierarchical n-gram analysis functionality +89/-0    state-word-reporter.rs State Word Reporter for Document Analysis                                src/bin/state-word-reporter.rs • Implements bag-of-words analysis for CRQ and SOP documents • Adds predicate-based word classification system • Provides document-specific word extraction and reporting • Includes global predicate matching for technical terms +86/-0    crq_parser.rs Basic CRQ Document Parser Implementation                                  src/crq_parser.rs • Adds basic CRQ document parsing with section extraction • Implements regex-based markdown parsing for CRQ structure • Provides structured data extraction from CRQ documents • Includes error handling for missing sections +97/-0    ngram_analyzer.rs N-gram Analysis Library with Hierarchical Decomposition    src/ngram_analyzer.rs • Implements hierarchical n-gram decomposition analysis • Adds n-gram generation and classification functionality • Provides text tokenization and n-gram presence detection • Includes configurable n-gram length support +94/-0    main.rs Wikipedia Data Extractor Main Application                                tools/wiki_data_extractor/src/main.rs • Creates main application for Wikipedia and Wikidata extraction • Implements link processing and entity fetching workflow • Adds filtering for valid Wikipedia article links • Provides comprehensive error handling and logging +66/-0    cache.rs Wikipedia and Wikidata Caching System                                        wikipedia_extractor/src/cache.rs • Implements caching system for Wikipedia articles and Wikidata entities • Adds file-based cache with JSON serialization • Provides cache directory management and filename sanitization • Includes error handling for cache operations +73/-0    crq_parser.rs Basic CRQ Parser with Action Classification                            tools/crq-parser/src/crq_parser.rs • Implements basic CRQ parsing with next step determination • Adds simple keyword-based classification system • Provides basic section parsing for CRQ documents • Includes NextStep enum for action classification +84/-0    main.rs Hash Extractor with URL Processing Pipeline                            hash_extractor_rust/src/main.rs • Creates hash extraction tool for URL processing • Implements unique URL reporting with hash replacement • Integrates multiple reporting modules for analysis • Provides comprehensive URL processing pipeline +78/-0    github_counter.rs GitHub Repository Counter with JSON-LD Output                        hash_extractor_rust/src/github_counter.rs • Implements GitHub repository counting functionality • Adds JSON-LD output format for repository statistics • Provides regex-based GitHub URL extraction • Includes structured data output with schema definitions +71/-0    wikipedia_parser.rs Wikipedia Article Parser with Caching                                        wikipedia_extractor/src/wikipedia_parser.rs • Implements Wikipedia article parsing with caching support • Adds HTML content extraction using scraper library • Provides link extraction and article data structuring • Includes integration with Wikipedia API client +63/-0    main.rs MediaWiki Template Function Generator CLI                                template_function_generator/src/main.rs • Creates template function generator for MediaWiki templates • Implements command-line interface for template processing • Adds parameter handling and Rust code generation • Provides template name sanitization and validation +58/-0    main.rs CRQ Parser Command-Line Interface                                                tools/crq-parser/src/main.rs • Creates command-line interface for CRQ parsing • Implements file input handling and content processing • Adds next step determination and formatted output • Provides error handling for file operations +60/-0    template_code_generator.rs WikiProject Template Function Code Generator                          wikimedia-template-introspector-core/src/template_code_generator.rs • Implements WikiProject-specific template function generation • Adds parameter handling for template invocations • Provides custom function naming based on WikiProject and template • Includes debug output and placeholder logic structure +55/-0    main.rs Simple URL Extractor Tool                                                                url_extractor/src/main.rs • Creates simple URL extraction tool using regex • Implements recursive directory traversal for file processing • Adds HTTP/HTTPS URL pattern matching • Provides stdout output for extracted URLs +20/-0    build.rs Build script for Wikipedia template code generation            generated_wiki_templates/build.rs • Creates a build script that generates Rust code from Wikipedia template strings • Uses template_function_generator to process template invocations • Generates individual .rs files for each template and creates a module structure • Handles template name sanitization and file organization +52/-0    file_type_reporter.rs File type analysis and reporting module                                    hash_extractor_rust/src/file_type_reporter.rs • Implements file type analysis from URL lists using regex and URL parsing • Counts file extensions from URL path segments with validation • Generates JSON reports of file type statistics • Uses serde for structured output formatting +48/-0    crq-parser-cli.rs CRQ markdown file parser CLI application                                  src/bin/crq-parser-cli.rs • Creates CLI tool for parsing CRQ markdown files using clap • Extracts CRQ ID from filename and parses content structure • Displays parsed CRQ information including title, objective, and dependencies • Integrates with submodules::crq_parser::CRQ for parsing logic +44/-0    domain_reporter.rs Domain analysis and reporting functionality                            hash_extractor_rust/src/domain_reporter.rs • Analyzes domain frequency from URL lists using URL parsing • Extracts base domains using simple heuristic for domain parts • Generates JSON reports of domain occurrence statistics • Provides structured domain analysis output +46/-0    word_classifier.rs Word predicate classification system implementation            src/word_classifier.rs • Defines WordPredicate struct for boolean predicate representation • Implements PredicateClassifier for text-based predicate extraction • Provides methods for extracting word predicates from text content • Supports case-insensitive predicate matching and classification +29/-0    main.rs WikiProject crate generator application                                    template_generator_bin/src/main.rs • Generates WikiProject crate content using wikimedia_template_introspector_core • Creates directory structure and lib.rs files for each WikiProject • Uses hardcoded base path for generated crate output • Provides automated crate generation workflow +21/-0    data_structures.rs Wikipedia and Wikidata data structure definitions                wikipedia_extractor/src/data_structures.rs • Defines core data structures for Wikipedia and Wikidata integration • Implements WikipediaLink, WikipediaArticle, WikidataFact, and WikidataEntity • Uses serde for serialization/deserialization support • Provides foundation types for Wikipedia data processing +29/-0    main.rs Git hash extraction utility from URL lists                              url_hash_extractor/src/main.rs • Extracts 40-character hexadecimal strings (Git hashes) from URL files • Uses regex pattern matching for hash identification • Processes line-by-line input from file with error handling • Outputs found hashes to standard output +24/-0    crq_state_recognizer.rs Code review state recognition functionality                            src/crq_state_recognizer.rs • Implements function to detect skipped code reviews due to size limits • Checks for specific keywords indicating review limitations • Provides boolean detection for CodeRabbitAI response analysis • Uses case-insensitive keyword matching for detection +15/-0    lib.rs Library module structure expansion and reorganization        src/lib.rs • Adds new public modules: crq_parser, word_classifier, ngram_analyzer, crq_state_recognizer • Makes lattice_model module public for external access • Updates imports to use word_classifier::PredicateClassifier • Maintains existing build_zos_lattice function with updated imports +8/-2      lib.rs Wikipedia extractor library public API definition                wikipedia_extractor/src/lib.rs • Exports core modules for Wikipedia data processing • Re-exports main data structures and functions for public API • Provides unified interface for Wikipedia article and Wikidata entity handling • Includes cache functionality for data persistence +9/-0      lib.rs Wikimedia template introspector library setup                        wikimedia-template-introspector/src/lib.rs • Imports template introspection functionality from core library • Sets up proc macro infrastructure with quote and syn • Includes duplicate import that should be cleaned up • Provides foundation for template processing macros +7/-0      lib.rs Generated wiki templates library interface                              generated_wiki_templates/src/lib.rs • Includes generated template modules from build script output • Uses include! macro to incorporate build-time generated code • Provides placeholder for additional public functions • Creates library interface for generated template functions +4/-0      main.rs Template generation CLI trigger application                            template_generator_cli/src/main.rs • Creates minimal CLI application that triggers build script execution • Provides informational output about template generation process • Serves as entry point for template generation workflow • Relies on build script for actual functionality +4/-0      lib.rs Solfunmeme WikiProject crate placeholder                                  generated_wikiproject_crates/solfunmeme/src/lib.rs • Creates placeholder library for 'solfunmeme' WikiProject crate • Contains only a comment indicating future generated functions • Represents generated crate structure for specific WikiProject • Provides foundation for WikiProject-specific functionality +1/-0      mirror_pr_to_fs.sh PR data mirroring and analysis script                                        tools/agent_comms_analysis/mirror_pr_to_fs.sh • Creates comprehensive PR data mirroring script using GitHub CLI • Extracts CRQ IDs from PR titles and organizes data by CRQ • Processes PR metadata, descriptions, and CodeRabbitAI comments • Generates structured markdown files with YAML frontmatter +77/-0    process_all_crq_branches.sh Batch PR data collection and analysis script                          tools/agent_comms_analysis/process_all_crq_branches.sh • Processes all open PRs and collects data into analysis directory • Extracts CRQ IDs from PR titles for organization • Calls mirror_pr_to_fs.sh for each PR with error handling • Creates centralized analysis data collection workflow +44/-0    new_crq.sh New CRQ file creation utility script                                          tools/new_crq.sh • Creates new CRQ files with standardized template structure • Automatically determines next CRQ number from existing files • Sanitizes titles for filename generation • Provides template with standard CRQ sections +45/-0    ping_coderabbitai.sh Automated CodeRabbitAI review request script                          tools/agent_comms_analysis/ping_coderabbitai.sh • Automatically pings CodeRabbitAI on PRs without existing comments • Checks for existing CodeRabbitAI comments before pinging • Processes all open PRs with error handling • Provides automated code review request functionality +39/-0    nextstep.sh Batch CodeRabbitAI review request script                                  nextstep.sh • Contains hardcoded GitHub CLI commands to request CodeRabbitAI reviews • Lists specific PR numbers for review requests • Provides batch review request functionality • Simple script for triggering multiple PR reviews +21/-0    classify_crq.sh CRQ file classification utility script                                      tools/classify_crq.sh • Provides CRQ file classification using crq-parser executable • Validates file existence and executable availability • Calls CRQ parser with file path argument • Includes error handling for missing dependencies +28/-0    launch_emacs_pane.sh Tmux Emacs integration and session management                        launch_emacs_pane.sh • Creates tmux session management for Emacs integration • Splits tmux window and launches Emacs in new pane • Sets EMACS_HOME environment variable for project context • Provides development environment setup automation +20/-0    update_pr_bases.sh PR base branch update automation script                                    tools/agent_comms_analysis/update_pr_bases.sh • Updates base branch of all open PRs to 'main' • Uses GitHub CLI to modify PR base branches • Processes all PRs with error handling and status reporting • Provides batch PR base branch management +23/-0    generate_crq_summary.sh CRQ summary report generation script                                          tools/generate_crq_summary.sh • Generates CRQ summary reports using crq_table_generator • Validates executable availability before execution • Provides error handling for missing dependencies • Creates summary table of CRQs grouped by status +16/-0
Tests	4 files integration_test.rs Wikipedia Extractor Integration Tests                                        wikipedia_extractor/tests/integration_test.rs • Adds comprehensive integration tests for Wikipedia extraction • Tests both Wikipedia article fetching and Wikidata entity retrieval • Includes validation of extracted content and metadata • Provides error handling and assertion testing +68/-0    test_crq_state_recognizer.rs CRQ State Recognizer Test Suite                                                    tests/test_crq_state_recognizer.rs • Adds comprehensive tests for CRQ state recognition • Tests review skip detection due to size limits • Includes positive and negative test cases for various scenarios • Provides validation for rate limit and normal review detection +85/-0    integration_test.rs Web Spider Corpus Builder Integration Test                              tools/web_spider_corpus_builder/tests/integration_test.rs • Adds integration test for web spider corpus builder • Tests markdown URL extraction and HTML content fetching • Includes build verification and output validation • Provides cleanup and temporary file management +59/-0    lib.rs Lattice Code Generator Test Assertion Updates                        lattice_code_generator/src/lib.rs • Updates test assertions to match generated code format • Fixes whitespace and formatting expectations in tests • Adjusts enum variant and method call formatting validation • Corrects prime value type test assertions +12/-12
Miscellaneous	2 files lattice_model.rs Lattice Model Error Message Improvement                                    src/lattice_model.rs • Updates assertion error message for better clarity • Changes "unit value count" to "value count" in error message • Improves error message consistency and readability +1/-25    generation_log.txt Add build process generation log file                                        generation_log.txt • Added single line log entry about file lock blocking • Indicates build directory lock waiting status • Simple build process logging output +1/-0
Configuration changes	2 files flake.nix Nix flake structure simplification and cleanup                      flake.nix • Simplifies flake structure by removing nested forAllSystems function • Maintains all existing packages and development shell configuration • Preserves checks for gitoxide, submod, and magoo submodules • Removes shellHook from devShell as per user instruction +129/-137 .gitmodules Add terlar-emacs-config submodule for Emacs configuration .gitmodules • Added new submodule entry for terlar-emacs-config • Points to https://github.com/terlar/emacs-config repository • Located at path .emacs.d/terlar-emacs-config +3/-0
Documentation	3 files pr_description_jmikedupont2.md CRQ-51 meta lattice application PR description                      analysis_data/comms/git/jmikedupont2/CRQ-51/pr_description_jmikedupont2.md • Contains comprehensive PR description for CRQ-51 meta lattice application • Includes detailed technical documentation and implementation walkthrough • Provides mermaid diagram and file-by-file analysis • Documents extensive lattice framework implementation with 1177 lines +1177/-0 002_coderabbitai.md CodeRabbitAI analysis and strategic recommendations            analysis_data/comms/git/CRQ-34/coderabbitai/responses/002_coderabbitai.md • Contains CodeRabbitAI response analyzing lattice framework implementation • Provides strategic recommendations for project phases and next steps • Includes comprehensive assessment of accomplished work • Offers specific action items and community engagement suggestions +66/-0    pr_description_jmikedupont2.md Add comprehensive CRQ-42 PR description documentation        analysis_data/comms/git/jmikedupont2/CRQ-42/pr_description_jmikedupont2.md • Added comprehensive PR description document for CRQ-42 with 1986 lines of content • Includes detailed analysis of grand unified framework implementation with lattice-based code analysis • Documents major features including code generation, repository analysis tools, and development environment enhancements • Contains extensive file walkthrough with mermaid diagrams and categorized change descriptions +1986/-0
Additional files	101 files init.el +348/-0  terlar-emacs-config +1/-0      Cargo.toml +14/-1    001.md +58/-0    001_coderabbitai.md +58/-0    002.md +70/-0    003.md +112/-0  004.md +8/-0      pr_description.md +131/-0  001.md +108/-0  001_coderabbitai.md +108/-0  002.md +69/-0    003.md +119/-0  004.md +8/-0      pr_description.md +149/-0  001.md +87/-0    001_coderabbitai.md +87/-0    002.md +296/-0  002_coderabbitai.md +16/-0    003.md +329/-0  004.md +8/-0      005.md +8/-0      006.md +16/-0    pr_description.md +1877/-0 001.md +58/-0    001_coderabbitai.md +58/-0    002.md +57/-0    003.md +315/-0  004.md +8/-0      005.md +8/-0      006.md +66/-0    pr_description.md +1963/-0 001.md +87/-0    001_coderabbitai.md +87/-0    002.md +242/-0  002_coderabbitai.md +16/-0    003.md +303/-0  004.md +8/-0      005.md +8/-0      006.md +16/-0    pr_description.md +2113/-0 001.md +87/-0    001_coderabbitai.md +87/-0    002.md +65/-0    002_coderabbitai.md +16/-0    003.md +284/-0  004.md +8/-0      005.md +8/-0      006.md +16/-0    pr_description.md +2091/-0 001.md +87/-0    001_coderabbitai.md +87/-0    002.md +66/-0    002_coderabbitai.md +16/-0    003.md +248/-0  004.md +8/-0      005.md +8/-0      006.md +16/-0    pr_description.md +1187/-0 001.md +302/-0  001_coderabbitai.md +87/-0    002.md +405/-0  002_coderabbitai.md +16/-0    003.md +87/-0    004.md +8/-0      005.md +8/-0      006.md +16/-0    pr_description.md +2084/-0 001.md +87/-0    001_coderabbitai.md +87/-0    002.md +56/-0    002_coderabbitai.md +16/-0    003.md +228/-0  004.md +8/-0      005.md +8/-0      006.md +16/-0    pr_description.md +2026/-0 001.md +87/-0    001_coderabbitai.md +87/-0    002.md +70/-0    002_coderabbitai.md +16/-0    003.md +271/-0  004.md +8/-0      005.md +8/-0      006.md +16/-0    pr_description.md +2043/-0 001.md +87/-0    001_coderabbitai.md +87/-0    002.md +300/-0  002_coderabbitai.md +16/-0    003.md +265/-0  004.md +8/-0      005.md +8/-0      006.md +16/-0    pr_description.md +2222/-0 001.md +87/-0    001_coderabbitai.md +87/-0    002.md +283/-0  002_coderabbitai.md +16/-0    003.md +364/-0  Additional files not shown

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Summary by CodeRabbit

• New Features

  • Added a comprehensive Emacs configuration with faster startup, cleaner UI, and leader-key mappings.
  • Introduced multiple CLI tools for repository/submodule scanning, project lattice building, and report analysis.
  • Added additional command-line utilities and integrations to streamline CRQ-driven workflows.

• Documentation

  • Added extensive CRQ documents, SOPs, reviewer guides, and PR descriptions outlining workflows and plans.

• Chores

  • Added a new submodule entry for an external Emacs configuration.
  • Expanded the workspace to include numerous new tools and utilities.
  • Introduced supporting dependencies and environment updates.

[qodo-merge-pro]

PR Reviewer Guide 🔍

Here are some key observations to aid the review process:

⏱️ Estimated effort to review: 4 🔵🔵🔵🔵⚪

🧪 PR contains tests

🔒 Security concerns Path traversal: In 'tools/agent_comms_analysis/response_analyzer/src/main.rs', the 'author' field from YAML is used directly to construct directories and filenames without sanitization, which can enable directory traversal (e.g., author containing "../"). Sanitize or restrict allowed characters (e.g., [A-Za-z0-9_-]) before using it in paths.

⚡ Recommended focus areas for review Possible Issue Template parser and code generator appear incorrect: the regex seems to expect triple braces and the codegen uses an escaped format string with mismatched arguments and an invalid positional parameter name format, likely causing parse failures and generated code compile errors. let re = Regex::new(r"{{\{{(?P<name>[^|]+)(?:\|(?P<params>.*))?}}\}}").unwrap(); if let Some(caps) = re.captures(input) { let name = caps["name"].to_string(); let params_str = caps.name("params").map_or("", |m| m.as_str()); let params = if params_str.is_empty() { Vec::new() } else { params_str.split('|').map(|s| s.to_string()).collect() }; Some(TemplateInvocation { name, params }) } else { None } } pub fn generate_rust_function(invocation: &TemplateInvocation) -> String { let fn_name_str = format!("render_{}", invocation.name.to_lowercase().replace(" ", "_")); let fn_name = Ident::new(&fn_name_str, proc_macro2::Span::call_site()); let mut param_declarations = Vec::new(); let mut param_assignments = Vec::new(); let mut format_args = Vec::new(); for (i, param) in invocation.params.iter().enumerate() { if param.contains('=') { let parts: Vec<&str> = param.splitn(2, '=').collect(); let param_name_str = parts[0].trim().to_lowercase().replace(" ", "_"); let param_value_str = parts[1].trim(); let param_ident = Ident::new(&param_name_str, proc_macro2::Span::call_site()); param_declarations.push(quote! { #param_ident: &str }); param_assignments.push(quote! { let #param_ident = #param_value_str; }); format_args.push(quote! { #param_ident = #param_ident }); } else { // Positional parameter let param_name_str = format!("param{{}}", i + 1); let param_ident = Ident::new(&param_name_str, proc_macro2::Span::call_site()); param_declarations.push(quote! { #param_ident: &str }); param_assignments.push(quote! { let #param_ident = #param_ident; }); format_args.push(quote! { #param_ident }); } } let expanded = quote! { pub fn #fn_name(#(#param_declarations),*) -> String { format!("Template: {{}} Parameters: {{}}", #(#format_args),*) } Security Unsanitized use of the 'author' metadata in filesystem paths may allow directory traversal when organizing files; sanitize or whitelist the author string before using it in paths. Some(m) => m.as_str(), None => { eprintln!("Could not find CRQ ID in path: {:?}", old_path); continue; } }; let file_name = old_path.file_name().unwrap().to_str().unwrap(); let file_stem = old_path.file_stem().unwrap().to_str().unwrap(); let extension = old_path.extension().unwrap().to_str().unwrap(); let mut new_dir = PathBuf::from(base_dir); new_dir.push(&author); new_dir.push(crq_id); // Handle 'responses' subdirectory if present in the original path if old_path.components().any(|c| c.as_os_str() == "responses") { new_dir.push("responses"); } Logic Issue In generate_commands mode, commands are printed but not appended to the script buffer, resulting in an output script with only the shebang; push the generated 'gh pr comment' lines into the commands vector. let mut commands_to_write = Vec::new(); commands_to_write.push("#!/usr/bin/env bash".to_string()); for crq_id in crq_reports.keys().cloned().collect::<Vec<String>>() { if let Some(entry) = crq_reports.get(&crq_id) { if let NextStep::ReviewSkipped = entry.next_step { if let Some(pr_number) = crq_to_pr_map.get(&crq_id) { println!("gh pr comment {} -b \"@coderabbitai review\"", pr_number); } else { eprintln!("Warning: PR number not found for CRQ: {}", crq_id); } } } } if let Some(output_path) = args.output_script {

[coderabbitai]

Skipped: Cannot respond to another bot.

[qodo-merge-pro]

PR Code Suggestions ✨

Explore these optional code suggestions:

Category	Suggestion	Impact
Possible issue	Fix regex and invalid parameter identifiers The regex does not correctly match {{...}} and the positional parameter name uses an invalid identifier (param{}). Fix the regex escaping and generate valid parameter names to prevent test failures and panics. Use a non-greedy params group to avoid over-capture. wikimedia-template-introspector-core/src/lib.rs [10-51] pub fn parse_template_invocation(input: &str) -> Option<TemplateInvocation> { - let re = Regex::new(r"{{\{{(?P<name>[^|]+)(?:\|(?P<params>.*))?}}\}}").unwrap(); + let re = Regex::new(r"\{\{(?P<name>[^|}]+)(?:\|(?P<params>.*?))?\}\}").unwrap(); if let Some(caps) = re.captures(input) { let name = caps["name"].to_string(); let params_str = caps.name("params").map_or("", |m| m.as_str()); let params = if params_str.is_empty() { Vec::new() } else { params_str.split('|').map(|s| s.to_string()).collect() }; Some(TemplateInvocation { name, params }) } else { None } } ... } else { // Positional parameter - let param_name_str = format!("param{{}}", i + 1); + let param_name_str = format!("param{}", i + 1); let param_ident = Ident::new(&param_name_str, proc_macro2::Span::call_site()); param_declarations.push(quote! { #param_ident: &str }); param_assignments.push(quote! { let #param_ident = #param_ident; }); format_args.push(quote! { #param_ident }); } [To ensure code accuracy, apply this suggestion manually] Suggestion importance[1-10]: 9 __ Why: The suggestion correctly identifies a faulty regex for parsing templates and an invalid identifier generation for positional parameters, which would cause runtime panics.	High
	Fix stray brace and redundant filter There is an extra closing brace at the end causing a syntax error, and the nested duplicate URL filter is redundant. Merge the conditions into a single if and remove the stray brace to restore compilation. This keeps filtering behavior identical while fixing the parse error. tools/wiki_data_extractor/src/main.rs [28-67] for link in article.links { println!(" Processing link: {}", link.href); if let Ok(url) = base_url.join(&link.href) { - if url.domain() == Some("en.wikipedia.org") && url.path().starts_with("/wiki/") && !url.path().contains(":") && !url.path().contains("#") { - if url.domain() == Some("en.wikipedia.org") && url.path().starts_with("/wiki/") && !url.path().contains(":") && !url.path().contains("#") && - !url.path().starts_with("/wiki/Special:") && - !url.path().starts_with("/wiki/Wikipedia:") && - !url.path().starts_with("/wiki/File:") && - !url.path().starts_with("/wiki/Category:") && - !url.path().starts_with("/wiki/Template:") && - !url.path().starts_with("/wiki/Help:") && - !url.path().starts_with("/wiki/Portal:") && - !url.path().starts_with("/wiki/Talk:") { - let title = url.path().trim_start_matches("/wiki/").replace(" ", "_"); + if url.domain() == Some("en.wikipedia.org") + && url.path().starts_with("/wiki/") + && !url.path().contains(':') + && !url.path().contains('#') + && !url.path().starts_with("/wiki/Special:") + && !url.path().starts_with("/wiki/Wikipedia:") + && !url.path().starts_with("/wiki/File:") + && !url.path().starts_with("/wiki/Category:") + && !url.path().starts_with("/wiki/Template:") + && !url.path().starts_with("/wiki/Help:") + && !url.path().starts_with("/wiki/Portal:") + && !url.path().starts_with("/wiki/Talk:") + { + let title = url.path().trim_start_matches("/wiki/").replace(' ', "_"); println!("\n --- Attempting to fetch Wikidata for Wikipedia Link: {} ---", title); let entity_result = fetch_and_cache_wikidata_entity(&client, Some(&title), None).await; match entity_result { Ok(Some(entity)) => { println!(" Wikidata Entity ID: {}", entity.id); println!(" Wikidata Entity Label: {}", entity.label); println!(" Wikidata Facts (Property: Value):"); for fact in entity.facts { println!(" - {}: {}", fact.property, fact.value); } - }, + } Ok(None) => { println!(" No Wikidata entity found for {}", title); - }, + } Err(e) => { eprintln!(" Error fetching Wikidata for {}: {}", title, e); } } } } } Ok(()) -} -} [To ensure code accuracy, apply this suggestion manually] Suggestion importance[1-10]: 9 __ Why: The suggestion correctly identifies a stray closing brace that causes a compilation error and simplifies the logic by removing a redundant nested if statement.	High
	Fix quote interpolation usage quote! cannot interpolate field access like #invocation.name. Bind the field to a local variable and interpolate that instead. This fixes a compile error during macro expansion. wikimedia-template-introspector-core/src/template_code_generator.rs [30-45] // Placeholder for custom logic. For now, just print the template and its parameters. +let template_name = &invocation.name; let debug_print = if param_names.is_empty() { quote! { - println!("Executing WikiProject: {} Template: {}", #wikiproject_name, #invocation.name); + println!("Executing WikiProject: {} Template: {}", #wikiproject_name, #template_name); } } else { let format_str = format!( "Executing WikiProject: {} Template: {} with params: {}", wikiproject_name, - invocation.name, + template_name, param_names.iter().map(|p| format!("{}: {{}}", p)).collect::<Vec<String>>().join(", ") ); quote! { println!(#format_str, #(#param_names),*); } }; [To ensure code accuracy, apply this suggestion manually] Suggestion importance[1-10]: 9 __ Why: The suggestion correctly identifies that quote! cannot interpolate field access like #invocation.name, which would cause a compilation error, and provides the correct fix.	High
	Remove cargo calls in build script Invoking cargo from a build script can cause recursive builds and is unsupported. Generate minimal valid Rust stubs directly in build.rs to avoid re-entrant cargo calls and keep the build reliable. generated_wiki_templates/build.rs [19-50] for (i, template_string) in templates.iter().enumerate() { - let output = Command::new("cargo") - .arg("run") - .arg("-p") - .arg("template_function_generator") - .arg("--") - .arg(template_string) - .output() - .expect("Failed to execute template_function_generator"); - - if !output.status.success() { - eprintln!("Error generating function for template: {}", template_string); - eprintln!("Stderr: {}", String::from_utf8_lossy(&output.stderr)); - panic!("template_function_generator failed"); - } - - let generated_code = String::from_utf8_lossy(&output.stdout); + // Avoid invoking Cargo from build.rs; generate a minimal, valid Rust stub instead. + let escaped = template_string.replace('"', "\\\""); + let generated_code = format!( + "pub fn generated_template_{}() {{ println!(\"Generated from template: {}\"); }}", + i, escaped + ); let fn_name_raw = template_string .trim_start_matches("{{") .trim_end_matches("}}") .split('|') .next() .unwrap_or("unknown_template") .replace(":", "_") .replace("-", "_") .to_lowercase(); let dest_path = generated_dir.join(format!("{}.rs", fn_name_raw)); fs::write(&dest_path, generated_code.as_bytes()).unwrap(); mod_file_content.push_str(&format!("pub mod {};\n", fn_name_raw)); } [To ensure code accuracy, apply this suggestion manually] Suggestion importance[1-10]: 8 __ Why: The suggestion correctly points out that invoking cargo from a build.rs script is an anti-pattern that can lead to build failures, and proposes a safer alternative.	Medium
	Fix CRQ ID extraction logic splitn(2, '-') collapses the remainder into the second segment, yielding the whole filename instead of CRQ-XXX. Split on all dashes and take the first two segments to correctly extract the CRQ ID prefix. src/bin/crq-parser-cli.rs [26] // Extract CRQ ID from filename (e.g., CRQ-003-...) -> CRQ-003 -let crq_id = file_name.splitn(2, '-').take(2).collect::<Vec<&str>>().join("-"); +let crq_id = file_name.split('-').take(2).collect::<Vec<&str>>().join("-"); [To ensure code accuracy, apply this suggestion manually] Suggestion importance[1-10]: 8 __ Why: The suggestion correctly identifies a logic error where splitn would not correctly extract the CRQ-ID from filenames with more than two parts, and provides a simple fix.	Medium
	Remove invalid URL patterns Remove non-URL patterns and templated placeholders (regexes, env vars, stray quotes/backticks) as they are not valid fetchable URLs and will cause failures. Keep only resolvable absolute URLs or move patterns to a separate reference file. extracted_urls.txt [44] -https://raw.githubusercontent.com/the-lean-crate/cargo-diet/refs/tags/$CARGO_DIET_TAG/ci/install.sh" -https://github\.com/([^/:@]+)/([^/:@]+)/discussions/([0-9]+)$ -https://github.com/$REPOSITORY/releases/tag/$VERSION" -https://googlesource.com`. + [To ensure code accuracy, apply this suggestion manually] Suggestion importance[1-10]: 7 __ Why: The suggestion correctly points out that the file contains non-URL patterns like templates and regexes, which are not usable URLs and should be removed to improve data quality.	Medium
	Remove trailing punctuation Strip trailing punctuation and Markdown artifacts from URLs (e.g., ')', ').', '",' ',').' ). These characters make requests fail or redirect incorrectly when consumed by downstream processors. Normalize the affected lines to contain only valid URL characters. extracted_urls.txt [1] -https://facebook.github.io/watchman/) -https://youtu.be/JYH5ILv5g1g?si=bHLBPFJiZyRUTl6u&t=211. -https://github.com/jmforsythe/Git-Heat-Map/pull/6). +https://facebook.github.io/watchman/ +https://youtu.be/JYH5ILv5g1g?si=bHLBPFJiZyRUTl6u&t=211 +https://github.com/jmforsythe/Git-Heat-Map/pull/6 [To ensure code accuracy, apply this suggestion manually] Suggestion importance[1-10]: 6 __ Why: The suggestion correctly identifies that several URLs have trailing punctuation, which would cause them to be invalid and is a data quality issue.	Low
General	Remove duplicate URLs Deduplicate repeated URLs to avoid redundant processing, rate-limit issues, and skewed analytics. Keep a single instance of each unique URL. extracted_urls.txt [2-3] -https://github.com/GitoxideLabs/gitoxide https://github.com/GitoxideLabs/gitoxide https://github.com/bashandbone/submod -https://github.com/bashandbone/submod Apply / Chat Suggestion importance[1-10]: 5 __ Why: The suggestion correctly identifies that the file contains many duplicate URLs, and removing them would improve the efficiency of any downstream processing.	Low
More

[coderabbitai]

Walkthrough

Adds a comprehensive Emacs initialization file with performance tuning, utilities, keymaps, and package setup; introduces an Emacs config submodule in .gitmodules; expands Rust workspace and binaries in Cargo.toml; and adds extensive CRQ-related communication artifacts and PR descriptions across multiple CRQs, documenting workflows, guidance, and suggestions.

Changes

Cohort / File(s)	Summary
Emacs bootstrap/config .emacs.d/init.el	New init configuring load-paths, startup optimizations, UI defaults, GC tuning, helper macros/functions, keymaps, and use-package setups.
Emacs submodule & metadata .emacs.d/terlar-emacs-config, .gitmodules	Adds/updates submodule pointer and registers it in .gitmodules. No code changes in submodule content here.
Rust workspace manifest Cargo.toml	Expands [workspace] members, adds three binaries (crq-parser-cli, state-word-reporter, ngram-reporter), and adds regex dependency.
CRQ-021 comms & description analysis_data/comms/git/CRQ-021/coderabbitai/responses/*, analysis_data/comms/git/CRQ-021/pr_description.md	Adds autogenerated responses, reviewer guidance, and PR description referencing a CRQ branch/PR automation script and doc.
CRQ-023 comms & description analysis_data/comms/git/CRQ-023/coderabbitai/responses/*, analysis_data/comms/git/CRQ-023/pr_description.md	Adds documentation-only artifacts, walkthroughs, diagrams, and planning/automation guidance.
CRQ-024 comms & description analysis_data/comms/git/CRQ-024/coderabbitai/responses/*, analysis_data/comms/git/CRQ-024/pr_description.md	Adds large PR description of lattice framework/tooling plus multiple auto-generated responses and reviewer guides.
CRQ-34 comms & description analysis_data/comms/git/CRQ-34/coderabbitai/responses/*, analysis_data/comms/git/CRQ-34/pr_description.md	Adds PR descriptions, suggestions, and autogenerated responses; notes potential public API impacts within guidance docs.
CRQ-35 comms & description analysis_data/comms/git/CRQ-35/coderabbitai/responses/*, analysis_data/comms/git/CRQ-35/pr_description.md	Adds reviewer guides, suggestions, and auto-responses; focuses on lattice code consolidation and fixes (documentation).
CRQ-36 comms & description analysis_data/comms/git/CRQ-36/coderabbitai/responses/*, analysis_data/comms/git/CRQ-36/pr_description.md	Adds extensive PR description and multiple response artifacts; reviewer guidance highlights build issues (docs only).
CRQ-37 comms & description analysis_data/comms/git/CRQ-37/coderabbitai/responses/*, analysis_data/comms/git/CRQ-37/pr_description.md	Adds PR description and auto-responses with suggestions for process unification and lattice ecosystem (docs).
CRQ-38 comms & description analysis_data/comms/git/CRQ-38/coderabbitai/responses/*, analysis_data/comms/git/CRQ-38/pr_description.md	Adds PR description for submodules reconciliation and lattice tooling; reviewer guides and suggestions added.
CRQ-39 comms & description analysis_data/comms/git/CRQ-39/coderabbitai/responses/*	Adds auto-responses and reviewer guides; focuses on formatting, syntax notes, and test assertions (docs).

Sequence Diagram(s)

sequenceDiagram
  autonumber
  actor U as User
  participant E as Emacs
  participant P as Packages
  participant S as OS/FS

  U->>E: Launch Emacs
  activate E
  E->>E: Early init (UI/GC/file-handlers)
  E->>P: Bootstrap use-package (deferred)
  E->>E: Define keymaps/macros/utilities
  E->>S: Configure XDG/no-littering dirs
  E-->>U: Ready (after-init hooks, GC reset)
  deactivate E

Loading

sequenceDiagram
  autonumber
  actor Dev as Developer
  participant Scr as CRQ Script
  participant Git as Git
  participant GH as GitHub

  Dev->>Scr: Run CRQ branch/PR script
  Scr->>Git: Check existing branches/commits
  alt Branch missing
    Scr->>Git: Create feature/<crq>-<desc> from main
  end
  Scr->>Git: Commit CRQ file if needed
  Scr->>Git: Push branch to origin
  Scr->>GH: Create PR (title/body from CRQ)
  GH-->>Dev: PR URL/Status

Loading

Estimated code review effort

🎯 4 (Complex) | ⏱️ ~60 minutes

Poem

I tuned my burrow, swift and bright—
Lisp winds hum at startup’s light.
Rusty trails branch far and wide,
CRQs in paw, I hop with pride.
Submodules synced, the lattice grows—
Thump-thump! A review-ready rose. 🐇✨

Pre-merge checks and finishing touches

✅ Passed checks (3 passed)

Check name	Status	Explanation
Description Check	✅ Passed	Check skipped - CodeRabbit’s high-level summary is enabled.
Title Check	✅ Passed	The title "feat: CRQ-059 Wikipedia Wikidata Extractor Integration" is concise and directly names the primary change—integrating Wikipedia/Wikidata extractor functionality— which matches the workspace and Cargo.toml additions (wikipedia_extractor, wikimedia-template-introspector, etc.) described in the changeset; it is specific and developer-readable.
Docstring Coverage	✅ Passed	No functions found in the changes. Docstring coverage check skipped.

✨ Finishing touches

🧪 Generate unit tests

• Create PR with unit tests
• Post copyable unit tests in a comment
• Commit unit tests in branch feature/CRQ-059-wikipedia-wikidata-extractor-integration

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[coderabbitai]

Actionable comments posted: 23

Caution

Some comments are outside the diff and can’t be posted inline due to platform limitations.

⚠️ Outside diff range comments (9)

analysis_data/comms/git/CRQ-34/coderabbitai/responses/005.md (1)

8-9: Avoid bot-mention loops; assign a human or use labels.

@-mentioning a bot caused “Skipped: Cannot respond to another bot.” Assign to a user or add a triage label.

-@coderabbitai review the ticket.
+@<human-owner> please review this ticket.  
+Labels: triage, needs-review

analysis_data/comms/git/CRQ-36/coderabbitai/responses/004.md (1)

9-9: Remove stray numeric line at EOF.

The standalone "9" appears to be a line-number artifact; drop it.

-9

analysis_data/comms/git/CRQ-36/coderabbitai/responses/005.md (1)

9-9: Remove stray numeric line at EOF.

Drop the trailing "9".

-9

analysis_data/comms/git/CRQ-36/coderabbitai/responses/006.md (1)

17-17: Remove stray numeric line at EOF.

Drop the trailing "17".

-17

analysis_data/comms/git/CRQ-36/coderabbitai/responses/002_coderabbitai.md (1)

17-17: Remove stray numeric line at EOF.

Drop the trailing "17".

-17

analysis_data/comms/git/CRQ-36/coderabbitai/responses/001_coderabbitai.md (1)

88-88: Remove stray numeric line at EOF.

Drop the trailing "88".

-88

analysis_data/comms/git/CRQ-36/coderabbitai/responses/002.md (1)

66-66: Remove stray numeric line at EOF.

Drop the trailing "66".

-66

analysis_data/comms/git/CRQ-36/coderabbitai/responses/001.md (1)

88-88: Remove stray numeric line at EOF.

Drop the trailing "88".

-88

analysis_data/comms/git/CRQ-36/coderabbitai/responses/003.md (1)

285-285: Remove stray numeric line at EOF.

Drop the trailing "285".

-285

[coderabbitai]

🛠️ Refactor suggestion

Hardcoded Nix store paths break portability

Wrap add-to-list with existence checks to avoid errors on non-Nix systems; prefer environment-driven EMACSLOADPATH or submodule-provided paths.

-;; Hardcoded Nix-provided Emacs package paths
-(add-to-list 'load-path "/nix/store/9j3v5mhah2d7xvzpvkqkm8awy74za86p-emacs-magit-20240426.2118/share/emacs/site-lisp")
-...
-(add-to-list 'load-path "/nix/store/dhh42n7g4x7jz9bpixy9fqgq7ps4gqd3-emacs-utop-20220226.1308/share/emacs/site-lisp")
+;; Make Nix paths optional
+(defun cr/add-load-path-if-exists (p)
+  (when (file-directory-p p) (add-to-list 'load-path p)))
+(mapc #'cr/add-load-path-if-exists
+      '("/nix/store/9j3v5mha...-emacs-magit-20240426.2118/share/emacs/site-lisp"
+        "/nix/store/03haksb4...-emacs-rustic-20230130.912/share/emacs/site-lisp"
+        "/nix/store/a7jqxkn3...-emacs-cargo-mode-20240116.1949/share/emacs/site-lisp"
+        "/nix/store/0rb1yrjd...-emacs-rust-mode-20240415.936/share/emacs/site-lisp"
+        "/nix/store/pvmb22lh...-emacs-lsp-mode-20240427.2141/share/emacs/site-lisp"
+        "/nix/store/dlh2pqdw...-emacs-company-20240311.1943/share/emacs/site-lisp"
+        "/nix/store/74jddmpn...-emacs-flycheck-20240411.449/share/emacs/site-lisp"
+        "/nix/store/w9axsadk...-emacs-lsp-ui-20240424.412/share/emacs/site-lisp"
+        "/nix/store/xcypfabw...-emacs-dap-mode-20240424.1359/share/emacs/site-lisp"
+        "/nix/store/nbj1kf2f...-emacs-tuareg-20231009.2143/share/emacs/site-lisp"
+        "/nix/store/dhh42n7g...-emacs-utop-20220226.1308/share/emacs/site-lisp"))

🤖 Prompt for AI Agents

.emacs.d/init.el lines 1-13: these lines unconditionally add hardcoded Nix store
paths to load-path which breaks on non‑Nix systems; update them to only add a
path when it exists and prefer using EMACSLOADPATH or a configurable list.
Replace each bare add-to-list with a conditional that checks file-directory-p
(or file-exists-p) before adding, or build a list from (getenv "EMACSLOADPATH")
(split-string ...) and iterate adding only existing entries; this keeps the
behavior on Nix but avoids errors on other systems and allows
environment/submodule-driven paths.

[coderabbitai]

🛠️ Refactor suggestion

Undefined variable guard

init-file-debug is used but not defined. Define a default to avoid void-variable errors.

 ;; Assuming init-file-debug is not set, so verbose is nil and expand-minimally is t
+(defvar init-file-debug nil)
 (setq use-package-verbose nil
       use-package-expand-minimally t)

📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change

	;; Assuming init-file-debug is not set, so verbose is nil and expand-minimally is t
	(setq use-package-verbose nil
	use-package-expand-minimally t)
	;; Assuming init-file-debug is not set, so verbose is nil and expand-minimally is t
	(defvar init-file-debug nil)
	(setq use-package-verbose nil
	use-package-expand-minimally t)

🤖 Prompt for AI Agents

In .emacs.d/init.el around lines 25 to 28, the variable init-file-debug is
referenced but not guaranteed to be defined; add a safe default definition
before its use (e.g., define it only if unbound using a defvar or boundp check)
so init-file-debug is always defined (typically to nil) to prevent void-variable
errors, and include a brief docstring.

[coderabbitai]

🛠️ Refactor suggestion

Broken frame parameter for scroll bars

(vertical-scroll-bars) pushed without a value; use a cons with nil to disable.

-(push '(vertical-scroll-bars) default-frame-alist)
+(push '(vertical-scroll-bars . nil) default-frame-alist)

📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change

	(push '(undecorated . t) default-frame-alist)
	(push '(menu-bar-lines . 0) default-frame-alist)
	(push '(tool-bar-lines . 0) default-frame-alist)
	(push '(vertical-scroll-bars) default-frame-alist)
	(push '(undecorated . t) default-frame-alist)
	(push '(menu-bar-lines . 0) default-frame-alist)
	(push '(tool-bar-lines . 0) default-frame-alist)
	(push '(vertical-scroll-bars . nil) default-frame-alist)

🤖 Prompt for AI Agents

In .emacs.d/init.el around lines 60 to 64 the frame parameter for vertical
scroll bars is pushed as `(vertical-scroll-bars)` which is invalid; change the
push to use a cons with nil to disable scroll bars, i.e. push
`'(vertical-scroll-bars . nil)` onto default-frame-alist (replace the current
line) so Emacs receives a proper key/value pair.

[coderabbitai]

⚠️ Potential issue

Guard platform-specific advice

x-apply-session-resources may not exist on non-X builds.

-(advice-add #'x-apply-session-resources :override #'ignore)
+(when (fboundp 'x-apply-session-resources)
+  (advice-add #'x-apply-session-resources :override #'ignore))

🤖 Prompt for AI Agents

In .emacs.d/init.el around line 70, the code unconditionally adds advice for
x-apply-session-resources which may not exist on non‑X builds; change it to
first check that the symbol is available (e.g. using fboundp or
feature/window-system checks) and only call advice-add when
x-apply-session-resources is defined so the config won’t error on non‑X Emacs
builds.

[coderabbitai]

⚠️ Potential issue

Incorrect use of apply in define-repl

apply is misused; call make-comint-in-buffer directly or pass a list as the last arg to apply.

-         (unless (comint-check-proc ,repl-buffer)
-           (apply 'make-comint-in-buffer ,buffer-name buffer ,command nil ,@args))
+         (unless (comint-check-proc ,repl-buffer)
+           (make-comint-in-buffer ,buffer-name buffer ,command nil ,@args))

📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change

	(defmacro define-repl (fn-name buffer-name command &rest args)
	"Define a REPL function named FN-NAME running COMMAND inside BUFFER-NAME."
	(let ((repl-buffer (concat "*" buffer-name "*")))
	`(defun ,fn-name ()
	,(format "Run an inferior instance of %s inside Emacs." command)
	(interactive)
	(let ((buffer (get-buffer-create ,repl-buffer)))
	(unless (comint-check-proc ,repl-buffer)
	(apply 'make-comint-in-buffer ,buffer-name buffer ,command nil ,@args))
	(pop-to-buffer buffer)))))
	(defmacro define-repl (fn-name buffer-name command &rest args)
	"Define a REPL function named FN-NAME running COMMAND inside BUFFER-NAME."
	(let ((repl-buffer (concat "*" buffer-name "*")))
	`(defun ,fn-name ()
	,(format "Run an inferior instance of %s inside Emacs." command)
	(interactive)
	(let ((buffer (get-buffer-create ,repl-buffer)))
	(unless (comint-check-proc ,repl-buffer)
	(make-comint-in-buffer ,buffer-name buffer ,command nil ,@args))
	(pop-to-buffer buffer)))))

🤖 Prompt for AI Agents

.emacs.d/init.el lines 142-151: the macro uses (apply 'make-comint-in-buffer
,buffer-name buffer ,command nil ,@args) which is incorrect; replace the apply
call with a direct call to make-comint-in-buffer and use unquote-splicing for
args so it becomes a normal function invocation that passes the optional args
(i.e. call make-comint-in-buffer with ,buffer-name, buffer, ,command, nil and
,@args).

[coderabbitai]

🛠️ Refactor suggestion

⚠️ Potential issue

Parser will fail: required CRQ sections are not proper ### headings and names don’t match the parser contract.

Your CRQ parser (see src/crq_parser.rs) requires exact ### headings: Objective, Description, Expected Outcome, Justification/Benefit, Dependencies, Partial Progress/Learnings. Here, “Description” is bold text (not a heading), “Justification/Business Value” uses a different name, and “Objective/Expected Outcome/Partial Progress/Learnings” are missing—so parse_crq_markdown will return errors like “Objective section not found”.

Apply the structural fix below (adds Objective, normalizes Description, and inserts Partial Progress/Learnings placeholders):

 ## Change Request: crq 006 process unification kether review
-**Change Request (CRQ)**
-
-**Title:** Process Unification and Core Principle Alignment (Kether Review)
-
-**Description:**
+**Change Request (CRQ)**
+
+**Title:** Process Unification and Core Principle Alignment (Kether Review)
+
+### Objective
+TODO: Summarize the single unifying principle and alignment goals.
+
+### Description

Committable suggestion skipped: line range outside the PR's diff.

🧰 Tools

🪛 markdownlint-cli2 (0.17.2)

15-15: Emphasis used instead of a heading

(MD036, no-emphasis-as-heading)

🤖 Prompt for AI Agents

In analysis_data/comms/git/CRQ-37/pr_description.md around lines 14 to 21, the
CRQ markdown uses bold text and non-matching section names so parse_crq_markdown
fails; replace the bold "Description" with an exact "### Description" heading,
add a new "### Objective" section above Description, ensure there is an exact
"### Expected Outcome" section, rename "Justification/Business Value" to exactly
"### Justification/Benefit", add an exact "### Dependencies" section if missing,
and insert a "### Partial Progress/Learnings" placeholder so all six required
headings (Objective, Description, Expected Outcome, Justification/Benefit,
Dependencies, Partial Progress/Learnings) match the parser contract.

[coderabbitai]

💡 Verification agent

🧩 Analysis chain

Quick check script to ensure parser compatibility before merging.

---

🏁 Script executed:

#!/bin/bash
# Verify required CRQ sections exist as exact H3 headings
req='^(Objective|Description|Expected Outcome|Justification/Benefit|Dependencies|Partial Progress/Learnings)$'
file='analysis_data/comms/git/CRQ-37/pr_description.md'

echo "Checking required headings in $file"
for h in "Objective" "Description" "Expected Outcome" "Justification/Benefit" "Dependencies" "Partial Progress/Learnings"; do
  if ! rg -nP "^###\\s+${h}\\s*$" "$file" >/dev/null; then
    echo "MISSING: ### ${h}"
  else
    echo "OK: ### ${h}"
  fi
done

echo "Checking for emphasized H3 headings (should be plain):"
rg -nP '^###\s+\*' "$file" || echo "OK: no emphasized H3 headings"

Length of output: 592

---

Fix H3 formatting and make verification script portable

• Required H3 headings are present, but analysis_data/comms/git/CRQ-37/pr_description.md contains emphasized H3s that will break parsers: line 11 (### User description), line 62 (### PR Type), line 68 (### Description) — remove the ** so headings are plain (e.g., "### User description").
• The check script produced "/bin/bash: line 8: !: command not found" — avoid using if ! cmd in this context or ensure the script runs under bash. Replace the condition with a portable form, e.g.:
  if rg -nP "^###\s+${h}\s*$" "$file" >/dev/null; then echo "OK: ### ${h}"; else echo "MISSING: ### ${h}"; fi

🧰 Tools

🪛 markdownlint-cli2 (0.17.2)

15-15: Emphasis used instead of a heading

(MD036, no-emphasis-as-heading)

---

31-31: Unordered list indentation
Expected: 2; Actual: 4

(MD007, ul-indent)

---

32-32: Unordered list indentation
Expected: 2; Actual: 4

(MD007, ul-indent)

---

33-33: Unordered list indentation
Expected: 2; Actual: 4

(MD007, ul-indent)

---

34-34: Unordered list indentation
Expected: 2; Actual: 4

(MD007, ul-indent)

---

35-35: Unordered list indentation
Expected: 2; Actual: 4

(MD007, ul-indent)

---

37-37: Unordered list indentation
Expected: 2; Actual: 4

(MD007, ul-indent)

---

38-38: Unordered list indentation
Expected: 2; Actual: 4

(MD007, ul-indent)

---

39-39: Unordered list indentation
Expected: 2; Actual: 4

(MD007, ul-indent)

[coderabbitai]

🛠️ Refactor suggestion

Normalize heading name to match parser: “Justification/Benefit”.

Rename and promote to an H3 so the parser picks it up.

-**Justification/Business Value:**
+### Justification/Benefit

📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change

	**Justification/Business Value:**
	* **Ultimate Efficiency**: A unified process eliminates friction and waste, leading to unparalleled operational efficiency.
	* **Clarity of Purpose**: Ensures every action and decision is directly traceable to the core unifying principle, fostering absolute clarity.
	* **Resilience**: A process built around a fixed point of unity is inherently more robust and adaptable to change, as its fundamental nature remains constant.
	* **Simplified Governance**: Decision-making becomes simpler and more consistent when guided by a single, unifying principle.
	* **Holistic Optimization**: Moves beyond local optimizations to achieve global, systemic improvements.
	### Justification/Benefit
	* **Ultimate Efficiency**: A unified process eliminates friction and waste, leading to unparalleled operational efficiency.
	* **Clarity of Purpose**: Ensures every action and decision is directly traceable to the core unifying principle, fostering absolute clarity.
	* **Resilience**: A process built around a fixed point of unity is inherently more robust and adaptable to change, as its fundamental nature remains constant.
	* **Simplified Governance**: Decision-making becomes simpler and more consistent when guided by a single, unifying principle.
	* **Holistic Optimization**: Moves beyond local optimizations to achieve global, systemic improvements.

🤖 Prompt for AI Agents

In analysis_data/comms/git/CRQ-37/pr_description.md around lines 22 to 28, the
section header is written as bold text "Justification/Business Value:" which the
parser does not recognize; rename it to "Justification/Benefit" and promote it
to an H3 Markdown heading (### Justification/Benefit) so the parser will pick it
up, preserving the existing bullet content underneath.

[coderabbitai]

🛠️ Refactor suggestion

Promote Dependencies to a proper H3 heading.

Current bold label won’t be captured by the parser.

-**Dependencies:**
+### Dependencies

📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change

	**Dependencies:**
	* High-level strategic vision and leadership commitment.
	* Deep understanding of all existing project processes.
	* Openness to fundamental re-evaluation and change.
	### Dependencies
	* High-level strategic vision and leadership commitment.
	* Deep understanding of all existing project processes.
	* Openness to fundamental re-evaluation and change.

🤖 Prompt for AI Agents

In analysis_data/comms/git/CRQ-37/pr_description.md around lines 45 to 49, the
Dependencies label is formatted as bold text and should be promoted to an H3
heading so parsers can detect it; update the line "**Dependencies:**" to use an
H3 markdown heading (### Dependencies) and keep the following bullet list
unchanged so the content structure is preserved.

[coderabbitai]

🛠️ Refactor suggestion

Provide “Expected Outcome” as an H3 (parser requires this exact name).

Repurpose Verification bullets under the required heading.

-**Verification:**
+### Expected Outcome

Also add the missing section:

+### Partial Progress/Learnings
+TODO: Capture any partial progress, blockers, or learnings to date.

📝 Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change

	**Verification:**
	* The formalized process model is demonstrably simpler, more cohesive, and clearly aligned with the identified unifying principle.
	* Stakeholders express a profound understanding of the process's core essence and purpose.
	* Operational metrics show significant improvements in efficiency and consistency, attributable to process unification.
	### Expected Outcome
	* The formalized process model is demonstrably simpler, more cohesive, and clearly aligned with the identified unifying principle.
	* Stakeholders express a profound understanding of the process's core essence and purpose.
	* Operational metrics show significant improvements in efficiency and consistency, attributable to process unification.
	### Partial Progress/Learnings
	TODO: Capture any partial progress, blockers, or learnings to date.

🤖 Prompt for AI Agents

In analysis_data/comms/git/CRQ-37/pr_description.md around lines 54 to 58, the
"Verification" bullets must be repurposed under an H3 titled "Expected Outcome"
(parser requires that exact heading); change the heading to "### Expected
Outcome" and move the three Verification bullets beneath it, preserving their
wording and formatting; also add the missing section immediately after (insert a
clearly labeled placeholder header and brief TODO content for the missing
section so the reviewer can fill in the intended details).