-
Notifications
You must be signed in to change notification settings - Fork 2
Feature/self reflecting agent #1
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
base: master
Are you sure you want to change the base?
Feature/self reflecting agent #1
Conversation
This commit updates the following submodules to their latest respective states: - nixpacks: Updated to new commits. - source/github/jmikedupont2/orgs/Escaped-RDFa/namespace: Documentation migrated to mdBook. - source/github/meta-introspector/streamofrandom: Nested submodules updated. - vendor/rnix-parser: Added nix-inspector binary and flake app. Additionally, a new file `submodule_checkout_log.md` has been added.
This commit introduces several new files related to development, QA processes, documentation, and testing. - Added `build_qa_process.sh` and `start_qa_build.sh` for QA automation. - Included new documentation directories: `docs/educational_philosophy/` and `docs/shell_scripting_standards/`. - Created `docs/sops/SUBMODULE_SETUP_SOP.md` to document the process of setting up Git submodules. - Added `generate_nix_graph.sh` for Nix graph generation. - Included `manifests/` directory, likely for build manifests. - Added `rust.md` for Rust-related notes or documentation. - Introduced `test_flake/` and `test_provisional_flakes.sh` for flake testing.
This commit introduces the foundational concepts for a self-reflecting Gemini agent, as detailed in the new CRQ documents. It updates the `gemini-cli` submodule to include an intrinsic Nix flake, which is the first step towards a fully reproducible and self-aware agent.
Important Review skippedMore than 25% of the files skipped due to max files limit. The review is being skipped to prevent a low-quality review. 141 files out of 293 files are above the max files limit of 100. Please upgrade to Pro plan to get higher limits. You can disable this status message by setting the ✨ Finishing touches
🧪 Generate unit tests
Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out. Comment |
PR Reviewer Guide 🔍Here are some key observations to aid the review process:
|
PR Code Suggestions ✨Explore these optional code suggestions:
|
…tion This commit introduces the foundational elements for reproducible LLM interactions within a Nix-managed environment, aligning with the "Extreme Nixism" manifesto. Key changes include: - **Nix-LLM Manifesto:** Added `docs/extreme-nixism-llm-manifesto.md` outlining the vision for reproducible and auditable AI through Nix derivations. - **Gemini Interaction Package:** Created `pkgs/gemini-interaction/default.nix` to encapsulate Gemini CLI interactions as Nix derivations. - **Nested Environment Reconstruction:** Implemented a modular script-based approach (`reconstruct_nested_env.sh`, `rust_nix_entrypoint.sh`, `gemini_cli_entrypoint.sh`) to reliably enter nested Nix development environments. - **Flake Refinements:** Updated `flake.nix` and `pkgs/gemini-cli/default.nix` to correctly handle flake inputs, absolute paths, and `rust-bin` dependencies, resolving previous evaluation errors. - **Direnv Setup:** Added `setup_direnv.sh` and `.envrc` for future environment management. - **Debugging Tools:** Included `inspect_nix_env_stack.sh` and `test_reconstruction_env.sh` for environment inspection and testing. This lays the groundwork for treating LLM invocations as auditable, reproducible derivations.
…tion This commit introduces the foundational elements for reproducible LLM interactions within a Nix-managed environment, aligning with the "Extreme Nixism" manifesto. Key changes include: - **Nix-LLM Manifesto:** Added `docs/extreme-nixism-llm-manifesto.md` outlining the vision for reproducible and auditable AI through Nix derivations. - **Gemini Interaction Package:** Created `pkgs/gemini-interaction/default.nix` to encapsulate Gemini CLI interactions as Nix derivations. - **Nested Environment Reconstruction:** Implemented a modular script-based approach (`reconstruct_nested_env.sh`, `rust_nix_entrypoint.sh`, `gemini_cli_entrypoint.sh`) to reliably enter nested Nix development environments. - **Flake Refinements:** Updated `flake.nix` and `pkgs/gemini-cli/default.nix` to correctly handle flake inputs, absolute paths, and `rust-bin` dependencies, resolving previous evaluation errors. - **Direnv Setup:** Added `setup_direnv.sh` and `.envrc` for future environment management. - **Debugging Tools:** Included `inspect_nix_env_stack.sh` and `test_reconstruction_env.sh` for environment inspection and testing. This lays the groundwork for treating LLM invocations as auditable, reproducible derivations.
…and task management
This commit introduces a new Rust crate, `enum-self`, designed to programmatically represent the project's directory and file structure using a hierarchical enum system. Key features include: - Recursive enumeration of all top-level directories and their contents. - Modular organization of enum definitions into separate files for maintainability. - Derivation of `Debug`, `Clone`, `PartialEq`, `Eq`, `Hash`, `Serialize`, `Deserialize`, `PartialOrd`, and `Ord` traits for all enums, enabling enhanced introspection, comparison, and serialization. Challenges encountered during implementation, particularly with Rust edition compatibility and linker issues (`SIGSEGV` during `serde` and `proc-macro2` compilation), were addressed by reverting to Rust 2021 edition and cleaning the build cache. Further investigation into these environment-specific build issues is required for future Rust toolchain upgrades. This crate lays the groundwork for improved automated analysis and understanding of the project's topology.
This commit significantly enhances the `enum-self` Rust crate by adding comprehensive documentation and refactoring its internal structure for improved maintainability and clarity. Key changes include: - **Extensive Documentation:** Added detailed comments and docstrings to all Rust enum definitions and module files within `enum-self/src/`. Each enum now clearly describes its purpose and the components it represents. - **Modular Refactoring:** The enum definitions have been further modularized, with each top-level enum and its direct sub-enums residing in dedicated `.rs` files. This improves code organization and navigability. - **Build and Test Guide:** A new Markdown document, `docs/enum_self_guide.md`, has been created. This guide provides step-by-step instructions on how to build and test the `enum-self` crate using standard Cargo commands. It also includes a section addressing the challenges encountered with Nix builds and outlines a path for future Nix integration. This work prepares the `enum-self` crate for a "fresh start" by providing a clear, well-documented, and maintainable foundation for representing the project's topology. While Nix build issues were encountered and temporarily bypassed for this commit, the guide acknowledges these and sets the stage for future resolution.
- Creates a new `syn-wrapper` crate to parse Rust code using `syn`. - Introduces a `WrappedItem` enum in `enum-self` to represent wrapped items. - Integrates `syn-wrapper` into `enum-self` and adds a test. - Adds self-describing tests to `enum-self`. - Fixes various compilation issues related to dependencies and traits.
PR Type
Enhancement, Tests, Documentation
Description
• Implements comprehensive QA build orchestration system with modular scripts for Nix builds, linting, and dependency graph generation
• Adds self-reflecting agent infrastructure with tmux session management, crash recovery, and background process execution
• Creates extensive tooling ecosystem including Rust CLI tools for system tracing, log processing, and C code analysis
• Integrates vendored tools (
nixtract
,nixpkgs-lint
) and custom packages (gemini-cli
,tiktok_cli_adaptor
) into Nix flake• Adds emoji bytecode LLM machine and JSON-to-Markdown meme extractor for memetic code processing
• Includes comprehensive documentation of extracted meme tickets covering philosophical frameworks, mathematical concepts, and system architectures
• Provides social media integration tools with tweet generation and confirmation logging
• Enhances Android configuration with debugging and monitoring tools
Diagram Walkthrough
File Walkthrough
32 files
build_qa_process.sh
Add comprehensive QA build orchestration script
build_qa_process.sh
• Creates a comprehensive QA build orchestration script with logging,
timeout, and optional strace support
• Implements modular execution of
QA steps including Nix builds, linters, and dependency graph
generation
• Provides configurable parameters for timeout duration,
strace tracing, and verbose logging modes
boot.sh
Refactor boot script with crash recovery features
boot.sh
• Refactors tmux session management to use external
run_boot.sh
script• Updates log directory path to use
$HOME/logs/gemini
with properdirectory creation
• Adds crash recovery checks with git status, diff,
and log processor output
test_provisional_flakes.sh
Add provisional flake testing automation script
test_provisional_flakes.sh
• Creates script to iterate through provisional flake files from
manifest
• Applies QA process to each flake with detailed logging and
status reporting
• Generates comprehensive summary report with
success/failure statistics
build_and_report.sh
Refactor build script to use modular QA approach
build_and_report.sh
• Refactors to use modular QA scripts from
qa.d/
directory•
Implements proper exit status tracking and aggregation
• Removes
commented-out build commands in favor of modular approach
single_gemini_split.sh
Create unified Gemini tmux split management script
single_gemini_split.sh
• Combines functionality from
subtask.sh
andgemini_split.sh
intosingle script
• Provides functions for running commands in tmux splits
and launching Gemini CLI
• Includes automatic detection of Gemini CLI
invocation method (bun/npx/gemini)
run_boot.sh
Extract tmux session management to separate script
run_boot.sh
• Extracts tmux session management logic from main boot script
•
Handles session creation, command execution, and attachment
•
Configures Gemini CLI with specific model and interactive prompt
options
02_nix_linters.sh
Add modular Nix linting QA script
qa.d/02_nix_linters.sh
• Implements Nix formatting checks using
nixpkgs-fmt
• Adds Nix
linting validation using
nix-linter
• Provides proper exit status
handling and logging integration
01_nix_builds.sh
Add modular Nix builds QA script
qa.d/01_nix_builds.sh
• Implements Android and PC Nix build validation
• Provides proper
exit status tracking and error reporting
• Integrates with main QA
reporting system
extract_strace_paths.sh
Add strace log path extraction utility
extract_strace_paths.sh
• Creates utility to extract file paths from strace logs
• Copies
extracted files to target directory for analysis
• Includes filtering
for regular files and directory handling
start_qa_build.sh
Add background QA build execution script
start_qa_build.sh
• Provides background execution wrapper for QA build process
•
Implements configurable timeout, strace, and verbose mode options
•
Uses
nohup
for background process management with logginggemini_split.sh
Add Gemini CLI tmux split launcher script
gemini_split.sh
• Creates script to launch Gemini CLI in new tmux split window
•
Handles task file validation and Gemini CLI detection
• Integrates
with
subtask.sh
for tmux window managementgenerate_nix_graph.sh
Add Nix dependency graph generation script
generate_nix_graph.sh
• Creates standard operating procedure for Nix flake dependency graph
generation
• Uses
nixtract
tool to generate JSONL format dependencygraphs
• Includes proper error handling and output validation
enter_and_run_tracenix.sh
Add verbose tracenix execution environment script
enter_and_run_tracenix.sh
• Sets up verbose logging environment for tracenix execution
•
Configures Nix debug environment variables
• Captures and displays
tracenix output with proper cleanup
subtask.sh
Add tmux subtask execution utility
subtask.sh
• Creates utility for launching job scripts in new tmux split panes
•
Validates tmux session context and job script existence
• Provides
tmux pane management and selection functionality
tweet_tool.sh
Add temporary tweet generation utility
tools/social_media/tweet_tool.sh
• Creates temporary tweet generation tool with character limit
validation
• Provides tweet content formatting and length checking
•
Includes warning system for character limit violations
tweet-confirmation.sh
Add tweet confirmation logging utility
tools/social_media/tweet-confirmation.sh
• Implements tweet confirmation logging system
• Integrates with fiber
logging infrastructure
• Provides confirmation URL tracking and
logging
run_tracenix_verbose.sh
Add verbose tracenix execution wrapper
run_tracenix_verbose.sh
• Configures Rust logging environment for tracenix debugging
•
Executes tracenix with verbose output and proper exit code handling
•
Sets up debug-level logging for Rust applications
list_strace_paths.sh
Add Nix store path extraction from strace logs
list_strace_paths.sh
• Extracts unique Nix store paths from strace log files
• Filters
paths using regex patterns for Nix store structure
• Provides sorted
unique path listing functionality
update_index.sh
Add project file indexing utility
update_index.sh
• Creates file indexing system for project files
• Generates separate
indexes for different file types (md, rs, mzn)
• Includes Rust
Cargo.toml file discovery functionality
run_log_processor.sh
Add log processor execution wrapper
run_log_processor.sh
• Executes log processor with configuration file path
• Provides
simple wrapper for log processing functionality
flake.nix
Integrate vendored tools and custom packages in flake
flake.nix
• Adds vendored tools as local inputs (
nixtract-src
,nixpkgs-lint-src
)• Integrates custom
gemini-cli
andtiktok_cli_adaptor
packages•
Updates package definitions to use vendored tool sources
• Applies
overlays for enhanced package configurations
flake.nix
Add dedicated gemini-cli package flake
pkgs/gemini-cli/flake.nix
• Creates dedicated flake for gemini-cli package
• Defines development
shell with Node.js 22 environment
• Provides package definition with
specific nodejs version
default.nix
Add gemini-cli Nix package definition
pkgs/gemini-cli/default.nix
• Implements Nix package definition for gemini-cli
• Uses vendored
source from external directory
• Includes npm build process and binary
installation
shell.nix
Update shell environment with Rust support
shell.nix
• Updates nixpkgs source to use master branch instead of 23.11
• Adds
Rust toolchain support with
rustc
andcargo
android.nix
Enhance Android configuration with debugging tools
configurations/android.nix
• Adds system monitoring and debugging tools (strace, ltrace, htop,
iotop, iftop)
• Includes network utilities and process management
tools
• Adds OpenSSL for cryptographic functionality
main.rs
Add comprehensive CLI tool for Nix project management
pick-up-nix-cli/src/main.rs
• Implements CLI tool with evaluate, trace, and tracenix commands
•
Provides tool evaluation framework with experiment directory creation
• Integrates StraceGenerator for system call tracing functionality
main.rs
Add JSON to Markdown meme extractor tool
json_to_memes_extractor/src/main.rs
• Extracts JSON tickets from metameme and solfunmeme data files
•
Converts ticket data to Markdown format with metadata
• Implements
filename sanitization and content formatting
main.rs
Add C code if-statement complexity analyzer
tools/if-counter/src/main.rs
• Implements C code analysis tool for counting nested if statements
•
Uses
lang-c
crate for AST parsing and visitor pattern• Provides
complexity analysis for C source files
main.rs
Add emoji bytecode LLM machine implementation
memetic_code/emoji_llm_machine_rust/src/main.rs
• Creates emoji bytecode execution system for LLM operations
• Maps
emoji characters to specific machine actions and behaviors
•
Implements conceptual machine for processing emoji sequences
main.rs
Add configurable log processor with file analysis
memetic_code/log_processor/src/main.rs
• Implements log file processing with TOML configuration support
•
Provides directory traversal and file metadata extraction
• Includes
timestamp formatting and file listing functionality
mod.rs
Add system call tracing generator module
pick-up-nix-cli/src/generator/mod.rs
• Implements StraceGenerator for system call tracing
• Converts
rstrace syscalls to SystemEvent structures
• Provides command tracing
with timestamp and event type mapping
mod.rs
Add system event data structures for tracing
pick-up-nix-cli/src/events/mod.rs
• Defines SystemEvent data structures for tracing
• Implements event
types and data enums for different system events
• Provides
serializable event context and metadata structures
4 files
test_tracenix.sh
Add tracenix testing validation script
test_tracenix.sh
• Implements test script for
tracenix
functionality• Validates system
events capture and output patterns
• Provides basic test validation
with exit code checking
test.sh
Add basic Gemini split test script
test.sh
• Simple test script that calls
gemini_split.sh
with poetry task•
Provides basic testing functionality for Gemini split operations
test2.sh
Add alternative Gemini split test script
test2.sh
• Executes
single_gemini_split.sh
for testing unified functionality•
Provides alternative test path for single script approach
flake.nix
Add minimal test flake for validation
test_flake/flake.nix
• Creates minimal test flake for validation purposes
• Provides simple
hello package for testing flake functionality
9 files
882942_Bott_Periodicity_in_Topology.md
Add extracted Bott periodicity discussion ticket
docs/memes/extracted_tickets/882942_Bott_Periodicity_in_Topology.md
• Extracted ticket discussing Bott periodicity and its applications
•
Contains detailed mathematical conversation about 8-fold periodicity
•
Explores connections between topology, cognition, and system
architecture
950884_add_all_users_who_submitted_to_this_project_as_read_collaborator.md
Add extracted collaborator access ticket
docs/memes/extracted_tickets/950884_add_all_users_who_submitted_to_this_project_as_read_collaborator.md
• Simple extracted ticket about adding project contributors as
collaborators
• Contains minimal content with basic metadata structure
949508_NOVA_CONFT.md
Added extensive NOVA CO-NFT documentation with philosophical framework
docs/memes/extracted_tickets/949508_NOVA_CONFT.md
• Added a comprehensive 753-line document about a $NOVA CO-NFT project
• Includes philosophical content about love, interconnectedness, and
spiritual concepts
• Contains conversation transcripts between ChatGPT
and anonymous users about numbers, ontology, and meta-concepts
•
Features detailed token sale plans with numerological significance and
pricing structures
925937_Ticket_to_unpack_openai_url_and_expand_it.md
Added comprehensive quasi-meta-fractal ticket documentation
docs/memes/extracted_tickets/925937_Ticket_to_unpack_openai_url_and_expand_it.md
• Added a 1115-line document containing a ChatGPT conversation about
quasi-meta-fractal concepts
• Includes detailed discussion of
recursive systems, ontological mapping, and mathematical structures
•
Contains references to GitHub issues, repositories, and technical
frameworks
• Features philosophical exploration of meta-memes,
fractals, and self-referential systems
918822_so_this_self_improving_system_is_consuming_information_from_its_environment_encorporating_that_information_itno_itself_and_then_producing_modified_spores_and_not_only_that_but_training_for_its_childre.md
Added documentation on self-improving biological network systems
docs/memes/extracted_tickets/918822_so_this_self_improving_system_is_consuming_information_from_its_environment_encorporating_that_information_itno_itself_and_then_producing_modified_spores_and_not_only_that_but_training_for_its_childre.md
• Added a 41-line document describing self-improving biological
systems
• Covers concepts of information consumption, spore
modification, and mycelium networks
• Discusses collaborative learning
and ecosystem coordination through biological networks
• Includes
implications for AI and potential challenges of complex biological
systems
925180_Notebook_LM.md
Complete Meta-Meme Ecosystem Documentation with ZOS Framework
docs/memes/extracted_tickets/925180_Notebook_LM.md
• Added comprehensive documentation of the Meta-Meme Ecosystem and
Zero Ontology System (ZOS)
• Included detailed explanations of NFT1
protocol, emoji-based meta-language, and Paxos consensus
• Documented
recursive self-simulation concepts and memetic evolution processes
•
Added study guides, FAQs, and technical implementation details
937261_LISPasMaxwell0027sEquationsofSoftware.md
LISP to Emoji Translation and Maxwell's Equations Concept
docs/memes/extracted_tickets/937261_LISPasMaxwell0027sEquationsofSoftware.md
• Added conversation about translating LISP code into emoji
representations
• Documented the concept of LISP as "Maxwell's
Equations of Software"
• Included emoji-based translations of
eval/apply functions and semantic mappings
• Provided emoji key for
decoding the translated LISP expressions
memes.md
Semantic Hash Function Memes and Content-Addressable System
memes.md
• Added comprehensive meme taxonomy with semantic hash functions and
MiniZinc solver concepts
• Documented content-addressable emoji memes
with Gödel numbering
• Included table of prime memes with emoji
assignments and meta-meme classifications
• Added GitHub repository
integration as ontology meta-meme
950704_the_dao_that_you_can_influence_with_using_your_mobile_app__your_SOLFUNMEME_token_is_not_the_true_and_eternal_dao_that_hold_ths_black_hole_in_the_yang_side_of_the_yin.md
DAO Philosophy and Mathematical Topology Discussion
docs/memes/extracted_tickets/950704_the_dao_that_you_can_influence_with_using_your_mobile_app__your_SOLFUNMEME_token_is_not_the_true_and_eternal_dao_that_hold_ths_black_hole_in_the_yang_side_of_the_yin.md
• Added philosophical discussion connecting DAO concepts with Taoist
philosophy
• Documented mathematical topology interpretations of
yin-yang symbolism
• Included category theory concepts and Gödel
numbering relationships
• Added conversation about recursive systems
and ontological projections
101 files