DEV: Update environment.yml to use cogent3 from pip #7
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name: CI conda | |
on: | |
push: | |
branches: [ develop ] | |
pull_request: | |
branches: [ develop ] | |
jobs: | |
tests: | |
name: "Python ${{ matrix.python-version }}" | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash -el {0} | |
strategy: | |
matrix: | |
os: [macos-12, ubuntu-latest] | |
python-version: ["3.8", "3.9", "3.10"] | |
steps: | |
- uses: "actions/checkout@v3" | |
with: | |
fetch-depth: 0 | |
# Setup conda env | |
- uses: conda-incubator/setup-miniconda@v2 | |
with: | |
activate-environment: graphbin | |
environment-file: environment.yml | |
python-version: ${{ matrix.python-version }} | |
auto-activate-base: false | |
- name: "Setup graphbin on ${{ matrix.os }} for Python ${{ matrix.python-version }}" | |
run: | | |
python -m pip install --upgrade pip | |
pip install . | |
- name: "Generate coverage report on ${{ matrix.os }} for Python ${{ matrix.python-version }}" | |
run: | | |
pip install pytest pytest-cov | |
pytest --cov=graphbin --cov-report=xml --cov-append | |