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Add failing test case for neutral loss
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aeisenbarth committed Mar 11, 2024
1 parent 9c7e08d commit 111bece
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5 changes: 5 additions & 0 deletions metaspace_converter/tests/to_anndata_test.py
Original file line number Diff line number Diff line change
Expand Up @@ -36,9 +36,14 @@ def sm(metaspace_credentials) -> SMInstance:
@pytest.mark.parametrize(
("dataset_id", "database", "fdr", "metadata_as_obs", "add_optical_image"),
[
# Just downloading, metadata as uns
("2021-09-03_11h43m13s", ("CoreMetabolome", "v3"), 0.1, False, False),
# Metadata as obs
("2021-09-03_11h43m13s", ("CoreMetabolome", "v3"), 0.1, True, False),
# Add optical image for SquidPy
("2021-09-03_11h43m13s", ("CoreMetabolome", "v3"), 0.1, False, True),
# Dataset with custom database, neutral losses
("2022-11-18_16h40m47s", ("AE_spacem_tests", "v1"), 0.5, False, False),
],
)
def test_metaspace_to_anndata(
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