No such keg: /opt/homebrew/Cellar/r

No installed conda 'base' environment found at !If you are using this action in a self-hosted runner that already provides its own Miniconda installation, please specify its location with a `CONDA` environment variable. If you want us to download and install Miniconda or Miniforge for you, add `miniconda-version: "latest"` or `miniforge-version: "latest"`, respectively, to the parameters for this action.

--- re-building ‘AddingCustomFeatureEngineering.Rmd’ using knitr

processing vignette 'ConstrainedPredictors.Rmd' failed with diagnostics:

Vignette re-building failed.

Build process failed

Process completed with exit code 1.

--- re-building 'AddingCustomFeatureEngineering.Rmd' using knitr

processing vignette 'ConstrainedPredictors.Rmd' failed with diagnostics:

Vignette re-building failed.

Build process failed

Process completed with exit code 1.

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, conda-incubator/setup-miniconda@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config

HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!

No files were found with the provided path: /home/runner/work/PatientLevelPrediction/PatientLevelPrediction/check. No artifacts will be uploaded.

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, conda-incubator/setup-miniconda@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

No files were found with the provided path: D:/a/PatientLevelPrediction/PatientLevelPrediction/check. No artifacts will be uploaded.

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, conda-incubator/setup-miniconda@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.