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User data docs

User data docs #113

Triggered via pull request June 5, 2024 18:59
Status Failure
Total duration 27m 39s
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R-CMD-check.yaml

on: pull_request
Matrix: R-CMD-check
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16 errors and 4 warnings
macos-latest (release)
--- re-building ‘alphadiv.Rmd’ using rmarkdown
macos-latest (release)
processing vignette 'self-correlation.Rmd' failed with diagnostics:
macos-latest (release)
processing vignette 'user-data.Rmd' failed with diagnostics:
macos-latest (release)
Vignette re-building failed.
macos-latest (release)
Build process failed
macos-latest (release)
Process completed with exit code 1.
macos-latest (release)
No such keg: /opt/homebrew/Cellar/r
windows-latest (release)
--- re-building 'alphadiv.Rmd' using rmarkdown
windows-latest (release)
processing vignette 'self-correlation.Rmd' failed with diagnostics:
windows-latest (release)
processing vignette 'user-data.Rmd' failed with diagnostics:
windows-latest (release)
Vignette re-building failed.
windows-latest (release)
Build process failed
windows-latest (release)
Process completed with exit code 1.
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-latest (devel)
Process completed with exit code 1.
macos-latest (release)
No files were found with the provided path: /Users/runner/work/MicrobiomeDB/MicrobiomeDB/check. No artifacts will be uploaded.
macos-latest (release)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macos-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
windows-latest (release)
No files were found with the provided path: D:/a/MicrobiomeDB/MicrobiomeDB/check. No artifacts will be uploaded.