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Add energy to dataset #24

Merged
merged 19 commits into from
Apr 19, 2024
Merged

Add energy to dataset #24

merged 19 commits into from
Apr 19, 2024

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rousseab
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In this PR, I add the energy to the datasets read from LAMMPS.

I also resolve an issue around the flattening of position in the pandas dataframe written to parquet. The issue is described here https://www.notion.so/Position-flattening-issue-4f067dbaf8964c04b937059fee98d241.

I augment the tests by writing fake data to disk, processing it, and confirming that the processed output available in the datasets is what it should be given we know the input fake data. This immediately flags issues with flattening / unflattening and so should prevent a future regression.

@rousseab rousseab merged commit 947dcba into main Apr 19, 2024
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@rousseab rousseab deleted the add_energy_to_dataset branch April 19, 2024 17:49
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2 participants