ci test 8 #8
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| name: MODFLOW 6 continuous integration | |
| on: | |
| push: | |
| branches: | |
| - idm-netcdf-conus-ci | |
| paths-ignore: | |
| - '**.md' | |
| - '**.pdf' | |
| - '**.tex' | |
| - '**.jpg' | |
| - '**.jpeg' | |
| - '**.png' | |
| - '**.bbl' | |
| - '**.bib' | |
| - 'doc/**.dat' | |
| - 'doc/**.ipynb' | |
| - 'doc/**.py' | |
| - 'doc/**.sh' | |
| - 'doc/**.xlsx' | |
| - '.hpc/**' | |
| pull_request: | |
| branches: | |
| - master | |
| - develop | |
| paths-ignore: | |
| - '**.md' | |
| - '**.pdf' | |
| - '**.tex' | |
| - '**.jpg' | |
| - '**.jpeg' | |
| - '**.png' | |
| - '**.bbl' | |
| - '**.bib' | |
| - 'doc/**.dat' | |
| - 'doc/**.ipynb' | |
| - 'doc/**.py' | |
| - 'doc/**.sh' | |
| - 'doc/**.xlsx' | |
| - '.hpc/**' | |
| jobs: | |
| test_gfortran: | |
| name: Test gnu fortran | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ ubuntu-22.04, macos-12 ] | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| env: | |
| FC: gfortran | |
| GCC: 13 | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: modflow6 | |
| - name: Checkout modflow6-testmodels | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-testmodels | |
| path: modflow6-testmodels | |
| - name: Checkout modflow6-examples | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-examples | |
| path: modflow6-examples | |
| - name: Setup GNU Fortran ${{ env.GCC }} | |
| uses: fortran-lang/setup-fortran@v1 | |
| with: | |
| compiler: gcc | |
| version: ${{ env.GCC }} | |
| - name: Setup Micromamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: modflow6/environment.yml | |
| create-args: >- | |
| pkg-config | |
| netcdf-fortran | |
| init-shell: >- | |
| bash | |
| powershell | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Edit netcdf-fortran.pc | |
| if: runner.os == 'Linux' | |
| working-directory: modflow6 | |
| run: sed -i "s|libdir=/home/runner/micromamba/envs/modflow6//home/runner/micromamba/envs/modflow6/lib|libdir=/home/runner/micromamba/envs/modflow6/lib|g" /home/runner/micromamba/envs/modflow6/lib/pkgconfig/netcdf-fortran.pc | |
| - name: Edit netcdf-fortran.pc | |
| if: runner.os == 'macOS' | |
| working-directory: modflow6 | |
| run: sed -i '' -e "s|libdir=/Users/runner/micromamba/envs/modflow6//Users/runner/micromamba/envs/modflow6/lib|libdir=/Users/runner/micromamba/envs/modflow6/lib|g" /Users/runner/micromamba/envs/modflow6/lib/pkgconfig/netcdf-fortran.pc | |
| - name: Build modflow6 | |
| working-directory: modflow6 | |
| run: | | |
| nc-config --all | |
| nf-config | |
| meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin | |
| meson install -C builddir | |
| - name: Show build log | |
| if: failure() | |
| working-directory: modflow6 | |
| run: cat builddir/meson-logs/meson-log.txt | |
| - name: Unit test programs | |
| working-directory: modflow6 | |
| run: meson test --verbose --no-rebuild -C builddir | |
| - name: Update flopy | |
| working-directory: modflow6/autotest | |
| run: python update_flopy.py | |
| - name: Get executables | |
| working-directory: modflow6/autotest | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: | | |
| pytest -v --durations 0 get_exes.py | |
| - name: Test modflow6 | |
| working-directory: modflow6/autotest | |
| env: | |
| REPOS_PATH: ${{ github.workspace }} | |
| run: | | |
| pytest -v --durations 0 test_gwf_chd01.py --netcdf | |
| test_intel_fortran: | |
| name: Test intel fortran | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - {os: ubuntu-22.04, compiler: intel-classic, version: 2021.7} | |
| - {os: macos-12, compiler: intel-classic, version: 2021.7} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - name: Checkout modflow6 | |
| uses: actions/checkout@v4 | |
| with: | |
| path: modflow6 | |
| - name: Checkout modflow6-testmodels | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: MODFLOW-USGS/modflow6-testmodels | |
| path: modflow6-testmodels | |
| - name: Setup Micromamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: modflow6/environment.yml | |
| create-args: >- | |
| pkg-config | |
| netcdf-fortran | |
| init-shell: >- | |
| bash | |
| powershell | |
| cache-environment: true | |
| cache-downloads: true | |
| - name: Edit netcdf-fortran.pc | |
| if: runner.os == 'Linux' | |
| working-directory: modflow6 | |
| run: sed -i "s|libdir=/home/runner/micromamba/envs/modflow6//home/runner/micromamba/envs/modflow6/lib|libdir=/home/runner/micromamba/envs/modflow6/lib|g" /home/runner/micromamba/envs/modflow6/lib/pkgconfig/netcdf-fortran.pc | |
| - name: Edit netcdf-fortran.pc | |
| if: runner.os == 'macOS' | |
| working-directory: modflow6 | |
| run: sed -i '' -e "s|libdir=/Users/runner/micromamba/envs/modflow6//Users/runner/micromamba/envs/modflow6/lib|libdir=/Users/runner/micromamba/envs/modflow6/lib|g" /Users/runner/micromamba/envs/modflow6/lib/pkgconfig/netcdf-fortran.pc | |
| - name: Setup Intel Fortran | |
| uses: fortran-lang/setup-fortran@v1 | |
| with: | |
| compiler: ${{ matrix.compiler }} | |
| version: ${{ matrix.version }} | |
| - name: Update version files | |
| working-directory: modflow6/distribution | |
| run: python update_version.py | |
| - name: Build modflow6 | |
| working-directory: modflow6 | |
| run: | | |
| nc-config --all | |
| nf-config | |
| meson setup builddir -Ddebug=false --prefix=$(pwd) --libdir=bin | |
| meson install -C builddir | |
| - name: Show build log | |
| if: failure() | |
| working-directory: modflow6 | |
| run: cat builddir/meson-logs/meson-log.txt | |
| - name: Unit test programs | |
| working-directory: modflow6 | |
| run: meson test --verbose --no-rebuild -C builddir | |
| - name: Update flopy | |
| working-directory: modflow6/autotest | |
| run: python update_flopy.py | |
| - name: Get executables | |
| working-directory: modflow6/autotest | |
| env: | |
| GITHUB_TOKEN: ${{ github.token }} | |
| run: pytest -v --durations 0 get_exes.py | |
| - name: Test programs | |
| working-directory: modflow6/autotest | |
| env: | |
| REPOS_PATH: ${{ github.workspace }} | |
| run: | | |
| pytest -v --durations 0 test_gwf_chd01.py --netcdf |