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Test cases and (eventually) fixes for #114 #117

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Test cases and (eventually) fixes for #114 #117

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Commits on Jun 22, 2024

  1. starting off

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  2. Starting to add test contents; not yet working

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  3. Merge branch 'dev' into fix_114_typing_with_subject_IDs

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  4. Added a more involved test for dataset construction.

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  5. Added test case that (correctly) fails

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  6. Added test case that (correctly) fails

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  7. Merge branch 'fix_114_typing_with_subject_IDs' of github.com:mmcdermo… 

    …tt/EventStreamGPT into fix_114_typing_with_subject_IDs
    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  8. Added test case that (correctly) fails

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  9. Removed the unnecessary pandas conversion in the getting number of ev… 

    …ents per subject.
    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  10. Things are partially improved, but other tests are still failing. Inv… 

    …estigating
    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  11. This may have fixed it.

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  12. Added minor changes from another branch and more debug logs

    @pargaw
    pargaw committed Jun 22, 2024
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  13. Added assertion to check _filter_col_inclusion

    @pargaw
    pargaw committed Jun 22, 2024
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  14. Some more corrections to subject ID typing.

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  15. Fixed pytorch dataset issue (maybe)

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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  16. Tests still having challenges with shards not overlapping.

    @mmcdermott
    mmcdermott committed Jun 22, 2024
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Commits on Jun 23, 2024

  1. fixed broken pytorch dataset test given string conventions.

    @mmcdermott
    mmcdermott committed Jun 23, 2024
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  2. Other changes to try to get things working

    @mmcdermott
    mmcdermott committed Jun 23, 2024
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  3. Added some more logging and dropping of nulls for safety

    @mmcdermott
    mmcdermott committed Jun 23, 2024
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  4. Added flat rep changes from another branch

    @pargaw
    pargaw committed Jun 23, 2024
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  5. Added additional changes to fix flat_rep run from another branch

    @pargaw
    pargaw committed Jun 23, 2024
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  6. Set assertion error to warning log

    @pargaw
    pargaw committed Jun 23, 2024
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Commits on Jun 30, 2024

  1. Added functionality when do_update is False

    @pargaw
    pargaw committed Jun 30, 2024
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Commits on Jul 6, 2024

  1. Added debug statements for caching flat reps

    @pargaw
    pargaw committed Jul 6, 2024
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