[RELEASE] V0.6

CONTRIBUTING.md

@@ -85,7 +85,7 @@ Then one could plot the memory usage:
 4. Upload to Test PyPi
 
 
-    twine upload --repository-url https://test.pypi.org/legacy/ dist/*
+    twine upload dist/* --repository-url https://test.pypi.org/legacy/ --repository mne-connectivity
 
 
 5. Build docs locally
@@ -97,7 +97,6 @@ Then one could plot the memory usage:
 
 7. Make release to PyPi
 
-
     twine upload dist/*
 
 or if you have two-factor authentication enabled: <https://pypi.org/help/#apitoken>

doc/_static/versions.json

@@ -1,14 +1,19 @@
 [
     {
-        "name": "0.6 (devel)",
+        "name": "0.7 (devel)",
         "version": "dev",
         "url": "https://mne.tools/mne-connectivity/dev/"
     },
     {
-        "name": "0.5 (stable)",
-        "version": "0.5",
+        "name": "0.6",
+        "version": "stable",
         "url": "https://mne.tools/mne-connectivity/stable/"
     },
+    {
+        "name": "0.5",
+        "version": "0.5",
+        "url": "https://mne.tools/mne-connectivity/v0.5/"
+    },
     {
         "name": "0.4",
         "version": "0.4",

doc/whats_new.rst

@@ -16,17 +16,15 @@ Here we list a changelog of MNE-connectivity.
 
 .. _current:
 
-Version 0.6 (unreleased)
-------------------------
+Version 0.7 (in dev)
+--------------------
+
 
 
 Enhancements
 ~~~~~~~~~~~~
 
-- Add the option to set the number of connections plotted in :func:`mne_connectivity.viz.plot_sensors_connectivity` by `Qianliang Li`_ (:pr:`133`).
-- Allow setting colormap via new parameter ``cmap`` in :func:`mne_connectivity.viz.plot_sensors_connectivity` by `Daniel McCloy`_ (:pr:`141`).
-- Add support for multivariate connectivity methods in :func:`mne_connectivity.spectral_connectivity_epochs` and :func:`mne_connectivity.spectral_connectivity_time` by `Thomas Binns`_ and `Tien Nguyen`_ and `Richard Köhler`_ (:pr:`138`) and (:pr:`142`).
-
+- 
 
 Bug
 ~~~

doc/whats_new_previous_releases.rst

@@ -7,6 +7,21 @@
 What was new in previous releases?
 ==================================
 
+Version 0.6
+-----------
+
+This version introduces new functionality for computing multivariate connectivity methods, championed primarily by
+`Thomas Binns`_. The ``spectral_connectivity_time`` and ``spectral_connectivity_epochs`` functions
+now supports multivariate connectivity methods.
+
+Enhancements
+~~~~~~~~~~~~
+
+- Add the option to set the number of connections plotted in :func:`mne_connectivity.viz.plot_sensors_connectivity` by `Qianliang Li`_ (:pr:`133`).
+- Allow setting colormap via new parameter ``cmap`` in :func:`mne_connectivity.viz.plot_sensors_connectivity` by `Daniel McCloy`_ (:pr:`141`).
+- Add support for multivariate connectivity methods in :func:`mne_connectivity.spectral_connectivity_epochs` and :func:`mne_connectivity.spectral_connectivity_time` by `Thomas Binns`_ and `Tien Nguyen`_ and `Richard Köhler`_ (:pr:`138`) and (:pr:`142`).
+
+
 Version 0.5 (2023-01-13)
 ------------------------
 

pyproject.toml

@@ -1,6 +1,6 @@
 [build-system]
-build-backend = 'setuptools.build_meta'
-requires = ['setuptools >= 64.0.0']
+requires = ["setuptools>=45", "setuptools_scm[toml]>=6.2", "wheel"]
+build-backend = "setuptools.build_meta"
 
 [project]
 classifiers = [
@@ -20,13 +20,13 @@ classifiers = [
   'Topic :: Software Development',
 ]
 dependencies = [
-  'mne >= 1.2',
-  'netCDF4',
+  'mne >= 1.6',
+  'netCDF4 >= 1.6.5',
   'numpy >= 1.21',
-  'pandas',
+  'pandas >= 1.3.2',
   'scipy >= 1.4.0',
   'tqdm',
-  'xarray',
+  'xarray >= 2023.11.0',
 ]
 description = 'mne-connectivity: A module for connectivity data analysis with MNE.'
 keywords = [
@@ -41,9 +41,9 @@ maintainers = [
   {email = '[email protected]', name = 'Adam Li'},
 ]
 name = 'mne-connectivity'
-readme = 'README.md'
-requires-python = '~=3.9'
-version = "0.6.0.dev0"
+readme = { file='README.rst', content-type = "text/x-rst"}
+requires-python = '>=3.9'
+version = "0.6.0"
 
 [project.optional-dependencies]
 all = [
@@ -239,10 +239,7 @@ line-length = 88
 '__init__.py' = ['F401']
 
 [tool.setuptools]
-include-package-data = false
-
-[tool.setuptools.package-data]
-'mne_connectivity.iclabel.network' = ['assets/*']
+include-package-data = true
 
 [tool.setuptools.packages.find]
 exclude = ['mne_connectivity*tests']