chore: add .git-blame-ignore-revs #2121
Workflow file for this run
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name: FloPy continuous integration | |
on: | |
push: | |
pull_request: | |
branches: | |
- master | |
- develop | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
build: | |
name: Build | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash | |
timeout-minutes: 10 | |
steps: | |
- name: Checkout repo | |
uses: actions/checkout@v4 | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: 3.9 | |
cache: 'pip' | |
cache-dependency-path: pyproject.toml | |
- name: Install Python dependencies | |
run: | | |
pip install --upgrade pip | |
pip install build twine | |
pip install . | |
python -c "import flopy; print(f'{flopy.__version__}')" | |
- name: Build package | |
run: python -m build | |
- name: Check package | |
run: twine check --strict dist/* | |
lint: | |
name: Lint | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash | |
timeout-minutes: 10 | |
steps: | |
- name: Checkout repo | |
uses: actions/checkout@v4 | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: 3.9 | |
cache: 'pip' | |
cache-dependency-path: pyproject.toml | |
- name: Install Python dependencies | |
run: | | |
pip install . | |
pip install ".[lint]" | |
- name: Lint | |
run: ruff check . | |
- name: Check format | |
run: ruff format . --check | |
- name: Check CITATION.cff | |
run: | | |
cffconvert --validate | |
cffconvert -f apalike | |
cffconvert -f bibtex | |
smoke: | |
name: Smoke test | |
runs-on: ubuntu-latest | |
defaults: | |
run: | |
shell: bash | |
timeout-minutes: 10 | |
env: | |
PYTHON_VERSION: 3.9 | |
steps: | |
- name: Checkout repo | |
uses: actions/checkout@v4 | |
- name: Setup Python | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ env.PYTHON_VERSION }} | |
cache: 'pip' | |
cache-dependency-path: pyproject.toml | |
- name: Install Python dependencies | |
run: | | |
pip install --upgrade pip | |
pip install . | |
pip install ".[test, optional]" | |
- name: Install Modflow executables | |
uses: modflowpy/install-modflow-action@v1 | |
- name: Smoke test | |
working-directory: autotest | |
run: pytest -v -n=auto --smoke --cov=flopy --cov-report=xml --durations=0 --keep-failed=.failed | |
env: | |
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
- name: Upload failed test outputs | |
uses: actions/upload-artifact@v4 | |
if: failure() | |
with: | |
name: failed-smoke-${{ runner.os }}-${{ env.PYTHON_VERSION }} | |
path: autotest/.failed/** | |
- name: Upload coverage | |
if: github.repository_owner == 'modflowpy' && (github.event_name == 'push' || github.event_name == 'pull_request') | |
uses: codecov/codecov-action@v3 | |
with: | |
files: autotest/coverage.xml | |
test: | |
name: Test | |
needs: smoke | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: [ ubuntu-latest, macos-latest, windows-latest ] | |
python-version: [ 3.9, "3.10", "3.11", "3.12" ] | |
defaults: | |
run: | |
shell: bash -l {0} | |
timeout-minutes: 60 | |
steps: | |
- name: Checkout repo | |
uses: actions/checkout@v4 | |
- name: Setup Micromamba | |
uses: mamba-org/setup-micromamba@v1 | |
with: | |
environment-file: etc/environment.yml | |
cache-environment: true | |
cache-downloads: true | |
create-args: >- | |
python=${{ matrix.python-version }} | |
init-shell: >- | |
bash | |
powershell | |
- name: Install FloPy | |
run: pip install . | |
- name: Install Modflow-related executables | |
uses: modflowpy/install-modflow-action@v1 | |
- name: Install Modflow dev build executables | |
uses: modflowpy/install-modflow-action@v1 | |
with: | |
repo: modflow6-nightly-build | |
- name: Install triangle (macOS workaround) | |
if: runner.os == 'macOS' | |
uses: modflowpy/install-modflow-action@v1 | |
with: | |
repo: executables | |
ostag: mac | |
subset: triangle | |
- name: Update package classes | |
run: python -m flopy.mf6.utils.generate_classes --ref develop --no-backup | |
- name: Run tests | |
working-directory: autotest | |
run: | | |
pytest -v -m="not example" -n=auto --cov=flopy --cov-append --cov-report=xml --durations=0 --keep-failed=.failed --dist loadfile | |
env: | |
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
- name: Report coverage | |
working-directory: autotest | |
run: coverage report | |
- name: Upload failed test outputs | |
uses: actions/upload-artifact@v4 | |
if: failure() | |
with: | |
name: failed-${{ matrix.os }}-${{ matrix.python-version }} | |
path: autotest/.failed/** | |
- name: Upload coverage | |
if: github.repository_owner == 'modflowpy' && (github.event_name == 'push' || github.event_name == 'pull_request') | |
uses: codecov/codecov-action@v3 | |
with: | |
files: autotest/coverage.xml |