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MokaGuys

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  1. seglh-cnv seglh-cnv Public

    Scripts and docker images to run CNV pipelines

    R 3 1

  2. automate_demultiplex automate_demultiplex Public

    Scripts for routine analysis of clinical next generation sequencing (NGS) data at Synnovis Genetics

    Python 1 2

  3. helpdesk helpdesk Public archive

    1 3

  4. dnanexus_swiss_army_SNP_bcftools_filter dnanexus_swiss_army_SNP_bcftools_filter Public

    This repository contains the commands executed by the swiss army knife app (v3.0.0) to format a VCF according to GeL specifications for SNP ID checks

    Shell 1

  5. seglh-naming seglh-naming Public

    SEGLH naming schemes

    Python 1 1

  6. WGS_puberty_CNVs WGS_puberty_CNVs Public

    Scripts for filtering WGS Puberty SV data

    1

Repositories

Showing 10 of 189 repositories
  • dMLPA-flask Public

    Flask frontend to dMLPA dockerised R Scripts

    moka-guys/dMLPA-flask’s past year of commit activity
    Python 0 0 0 0 Updated Aug 19, 2024
  • dnanexus_ED_readcount_analysis Public

    This app calculates the readcount for a batch of samples for CNV calling using ExomeDepth.

    moka-guys/dnanexus_ED_readcount_analysis’s past year of commit activity
    Shell 0 0 2 1 Updated Aug 15, 2024
  • SCIP Public
    moka-guys/SCIP’s past year of commit activity
    0 0 0 0 Updated Aug 15, 2024
  • dnanexus_ED_cnv_calling Public

    Performs CNV calling using ExomeDepth.

    moka-guys/dnanexus_ED_cnv_calling’s past year of commit activity
    Shell 0 0 4 2 Updated Aug 15, 2024
  • dnanexus_archer_api_upload Public
    moka-guys/dnanexus_archer_api_upload’s past year of commit activity
    0 MIT 0 0 1 Updated Aug 13, 2024
  • archer_api_upload Public
    moka-guys/archer_api_upload’s past year of commit activity
    0 MIT 0 0 1 Updated Aug 12, 2024
  • integrity_checking Public

    Script to display a message box on the sequencers, with the goal of ensuring data is not lost should the data integrity check fail

    moka-guys/integrity_checking’s past year of commit activity
    Python 0 0 2 0 Updated Aug 9, 2024
  • SNP_haplotyper Public

    BASHer (BiAllellic SNP Haplotyper). This script filters and classifies SNPs for SNP Array data

    moka-guys/SNP_haplotyper’s past year of commit activity
    Python 0 0 1 1 Updated Aug 3, 2024
  • workstation_crontab Public
    moka-guys/workstation_crontab’s past year of commit activity
    0 0 1 0 Updated Jul 11, 2024
  • automate_demultiplex Public

    Scripts for routine analysis of clinical next generation sequencing (NGS) data at Synnovis Genetics

    moka-guys/automate_demultiplex’s past year of commit activity
    Python 1 2 13 0 Updated Jul 11, 2024
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