NGS_Automated-3.3.0

New

• make symlinks on complementary prm when copying array data prm

bugfixes

• only notify for failed pipelines when they were resubmitted once and failed again
• wrong logging of whether email notifications are enabled or not
• pullRawDataFromDS.sh: do not crash and make sure other batches are processed when a .finished for one batch is not present yet
• only log changes in a project's log dir when something has changed for that specific project
• continue with separate converted GS samplesheet as opposed to using in place conversion, which may get lost due to rsync from data staging server while processing is ongoing
• no cleanup of data on the staging machine in genomescan testgroup
• fixed no emailing of failed genomescan runs