Merge pull request #264 from RoanKanninga/master

fixed cramconversion issue with old tools being loaded
molgenis · Mar 28, 2024 · 71eba80 · 71eba80
2 parents 99addcd + a48e089
commit 71eba80
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bin/CramConversion.sh b/bin/CramConversion.sh
@@ -38,7 +38,7 @@ if [[ -z "${inputFolder:-}" ]]; then showHelp ; echo "inputFolder is not specifi
 if [[ -z "${workDir:-}" ]]; then workDir=$(pwd)/BAM; mkdir -p ${workDir} ; fi ; echo "workDir=${workDir}"
 if [[ -z "${reference:-}" ]]; then reference="/apps/data/1000G/phase1/human_g1k_v37_phiX.fasta"; fi ; echo "reference=${reference}"
 
-module load io_lib/1.14.6-foss-2015b
+module load io_lib
 module load SAMtools
 
 #To convert from CRAM -> BAM do: