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R-CMD-check

R-CMD-check #608

Workflow file for this run

# For help debugging build failures open an issue on the RStudio community with the 'github-actions' tag.
# https://community.rstudio.com/new-topic?category=Package%20development&tags=github-actions
on:
schedule:
- cron: "24 06 * * 1"
push:
branches:
- main
- master
paths-ignore:
- "Meta**"
- "memcheck**"
- "docs**"
- "**.git"
- "**.json"
- "**.md"
- "**.yml"
- "!**R-CMD-check.yml"
- "**.R[dD]ata"
- "**.Rpro*"
pull_request:
branches:
- main
- master
paths-ignore:
- "Meta**"
- "memcheck**"
- "docs**"
- "**.git"
- "**.json"
- "**.md"
- "**.yml"
- "!**R-CMD-check.yml"
- "**.R[dD]ata"
- "**.Rpro*"
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: windows-latest, r: 'release'}
- {os: macOS-latest, r: 'release'}
- {os: ubuntu-20.04, r: '4.1', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
- {os: ubuntu-20.04, r: 'release', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
- {os: ubuntu-20.04, r: 'devel', rspm: "https://packagemanager.rstudio.com/cran/__linux__/focal/latest"}
env:
_R_CHECK_CRAN_INCOMING_: true # Seemingly not set by --as-cran
_R_CHECK_FORCE_SUGGESTS_: false # CRAN settings
R_COMPILE_AND_INSTALL_PACKAGES: 'never'
_R_CHECK_THINGS_IN_CHECK_DIR_: false
R_REMOTES_STANDALONE: true
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
RSPM: ${{ matrix.config.rspm }}
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
steps:
- name: Checkout git repo
uses: actions/checkout@v4
- name: Set up R
uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
- name: Install apt packages (Linux)
if: runner.os == 'Linux'
run: |
sudo apt-get install \
texlive-latex-base texlive-fonts-recommended libcurl4-openssl-dev
- name: Set up R dependencies (Windows)
if: runner.os == 'Windows'
uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: |
ms609/TreeDistData
needs: |
check
coverage
- name: Set up R dependencies (Non-Windows)
if: runner.os != 'Windows'
uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: |
ms609/TreeDistData
phangorn=?ignore-before-r=4.1.0
needs: |
check
- name: Set up pandoc
uses: r-lib/actions/setup-pandoc@v2
- name: Check package
uses: r-lib/actions/check-r-package@v2
- name: Code coverage
if: runner.os == 'Windows'
run: covr::codecov()
shell: Rscript {0}