Skip to content

Commit

Permalink
Update codemeta.json
Browse files Browse the repository at this point in the history
  • Loading branch information
actions-user committed Jun 28, 2024
1 parent 217a8c0 commit 1d970c0
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions codemeta.json
Original file line number Diff line number Diff line change
Expand Up @@ -2,13 +2,13 @@
"@context": "https://doi.org/10.5063/schema/codemeta-2.0",
"@type": "SoftwareSourceCode",
"identifier": "TreeDist",
"description": "Implements measures of tree similarity, including information-based generalized Robinson-Foulds distances (Phylogenetic Information Distance, Clustering Information Distance, Matching Split Information Distance; Smith 2020) <doi:10.1093/bioinformatics/btaa614>; Jaccard-Robinson-Foulds distances (Bocker et al. 2013) <doi:10.1007/978-3-642-40453-5_13>, including the Nye et al. (2006) metric <doi:10.1093/bioinformatics/bti720>; the Matching Split Distance (Bogdanowicz & Giaro 2012) <doi:10.1109/TCBB.2011.48>; Maximum Agreement Subtree distances; the Kendall-Colijn (2016) distance <doi:10.1093/molbev/msw124>, and the Nearest Neighbour Interchange (NNI) distance, approximated per Li et al. (1996) <doi:10.1007/3-540-61332-3_168>. Includes tools for visualizing mappings of tree space (Smith 2022) <doi:10.1093/sysbio/syab100>, for calculating the median of sets of trees, and for computing the information content of trees and splits.",
"description": "Implements measures of tree similarity, including information-based generalized Robinson-Foulds distances (Phylogenetic Information Distance, Clustering Information Distance, Matching Split Information Distance; Smith 2020) <doi:10.1093/bioinformatics/btaa614>; Jaccard-Robinson-Foulds distances (Bocker et al. 2013) <doi:10.1007/978-3-642-40453-5_13>, including the Nye et al. (2006) metric <doi:10.1093/bioinformatics/bti720>; the Matching Split Distance (Bogdanowicz & Giaro 2012) <doi:10.1109/TCBB.2011.48>; Maximum Agreement Subtree distances; the Kendall-Colijn (2016) distance <doi:10.1093/molbev/msw124>, and the Nearest Neighbour Interchange (NNI) distance, approximated per Li et al. (1996) <doi:10.1007/3-540-61332-3_168>. Includes tools for visualizing mappings of tree space (Smith 2022) <doi:10.1093/sysbio/syab100>, for identifying islands of trees (Silva and Wilkinson 2021) <doi:10.1093/sysbio/syab015>, for calculating the median of sets of trees, and for computing the information content of trees and splits.",
"name": "TreeDist: Calculate and Map Distances Between Phylogenetic Trees",
"relatedLink": "https://ms609.github.io/TreeDist/",
"codeRepository": "https://github.com/ms609/TreeDist/",
"issueTracker": "https://github.com/ms609/TreeDist/issues/",
"license": "https://spdx.org/licenses/GPL-3.0",
"version": "2.7.1.9002",
"version": "2.7.1.9003",
"programmingLanguage": {
"@type": "ComputerLanguage",
"name": "R",
Expand Down Expand Up @@ -500,7 +500,7 @@
"SystemRequirements": "C++17, pandoc-citeproc"
},
"keywords": ["phylogenetics", "tree-distance"],
"fileSize": "1502.075KB",
"fileSize": "1511.343KB",
"citation": [
{
"@type": "ScholarlyArticle",
Expand Down Expand Up @@ -567,7 +567,7 @@
"email": "[email protected]"
}
],
"name": "TreeDist: Distances between Phylogenetic Trees. R package version 2.7.1.9002",
"name": "TreeDist: Distances between Phylogenetic Trees. R package version 2.7.1.9003",
"identifier": "10.5281/zenodo.3528124",
"@id": "https://doi.org/10.5281/zenodo.3528124",
"sameAs": "https://doi.org/10.5281/zenodo.3528124",
Expand Down

0 comments on commit 1d970c0

Please sign in to comment.