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v2.1.0
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@ms609 ms609 released this 12 Jul 07:57
· 410 commits to master since this release
2.1.0
6709ccf

New features

  • ConsensusInfo() quickly calculates the splitwise information content of the
    consensus of a set of trees, after Smith (forthcoming).
  • SplitwiseInfo() and ClusteringInfo() gain a p parameter to reflect the
    reduced information content of splits with lower support values, and a sum
    parameter to allow return of individual split information content.
  • KCDiameter() approximates the diameter of the Kendall–Colijn metric.
  • Plot3() (experimental) provides pseudo-3D plotting.

Renamed functions

  • Project()/ProjectionQuality() re-named to MapTrees()/MappingQuality().
  • SpectralClustering() re-named to SpectralEigens().

Improvements

  • Add self-organizing map example to treespace vignette.
  • Allow the specification of custom vectors in the Kendall–Colijn metric.
  • Faster all-to-all tree distance calculation.
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