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Gaming
🎮
Gaming
57 followers · 0 following

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair ExtraordinaireAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: YOLOAchievement: Arctic Code Vault Contributor

Highlights

  • Pro

Organizations

@incentivus @AppliedLinearAlgebra-Sharif @soal-sharif @Blockchain-Technology-Lab @PortPy-Project

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mtefagh/README.md

About me

I am a mathematician, computer scientist, and convex optimization expert with a track record of modeling computationally demanding problems in interdisciplinary fields. For example, in my Ph.D. at Stanford, I sped up the reconstruction of metabolic networks of tens of thousands of reactions by 30 times. In the last few years, I have dedicated my efforts to developing subroutines for the COBRA toolbox and also served as a moderator for COBRA.jl, both of which are optimization tools used in systems biology. Recently, I teamed up with collaborators from MSKCC to work on a new initiative called ProtPy, which is a similar open standard aimed at optimization techniques for improving radiotherapy treatment planning. Although it is still in its early stages, I am thrilled to be a part of it. Apart from my involvement in COBRA and ProtPy, I organized a nationwide optimization contest during my first year at university. The contest focused on a systems biology problem and was tailored to research-oriented individuals. I am particularly passionate about the concept of open science and decentralized science (DeSci). I have discovered that collective efforts within the scientific community align perfectly with my past experiences and interests.

Skills

  • General: Mathematical optimization, Data science, Graph theory
  • Languages: Julia, Python, Matlab
  • Familiar: R, Java, HTML
  • Tools: Jupyter, Git, LaTeX

Contact

Pinned Loading

  1. qfca qfca Public

    Compressed biological systems of tens of thousands of biochemical reactions by a hierarchical organization of pathways which speeds up the downstream analysis up to 3 times in addition to saving me…

    MATLAB 2 1

  2. swiftcore swiftcore Public

    Accelerated the state-of-the-art in genome-scale metabolic network reconstruction more than 10 times by convex optimization techniques such as factorization, approximation, and regularization

    HTML 5

  3. fee fee Public

    Designed an attack for Vitalik's EIP 1559 and proposed an alternative transaction fee pricing protocol based on the Almgren-Chriss framework and median price auctions

    Jupyter Notebook 6 2

  4. Incentivus Incentivus Public

    Redesigned Binance DEX match engine to make it even more autonomous and decentralized by in-protocol mechanisms which reduce the risk of relying on validators to choose the transactions to be inclu…

    2

  5. sparseQFCA.jl sparseQFCA.jl Public

    Developed a registered Julia package which quantifies the redundancies in genome-scale metabolic networks and provides local sparse certificates which are both efficiently verifiable and interpretable

    Jupyter Notebook 1 1

  6. opencobra/COBRA.jl opencobra/COBRA.jl Public

    High-level, high-performance, constraint-based reconstruction and analysis in Julia

    Julia 62 31