Update CI to use Official miniconda actions. #58

	# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
	# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

	name: "Notebook Pipeline (Ubuntu)"

	on:
	pull_request:
	branches:
	- main

	jobs:
	build:

	runs-on: ubuntu-latest
	strategy:
	fail-fast: false
	matrix:
	python-version: ["3.8"]

	steps:
	- name: Install pdflatex
	run: \|
	sudo apt-get update
	sudo apt-get install texlive-latex-base pdftk latex2html
	- uses: actions/checkout@v3
	- uses: conda-incubator/setup-miniconda@v2
	with:
	python-version: ${{ matrix.python-version }}
	mamba-version: "*"
	channels: conda-forge,defaults
	channel-priority: true
	- name: Conda info
	shell: bash -el {0}
	run: conda info
	- name: Install Dependencies & Main Code
	shell: bash -el {0}
	run: \|
	pip install --upgrade pip
	pip install pytest
	mamba install -c conda-forge python=${{ matrix.python-version }} cython=0.29.36 tempo2 enterprise-pulsar enterprise_extensions scikit-sparse
	pip install -e .
	- name: Test with Standard Pulsar
	shell: bash -el {0}
	run: \|
	export PULSAR_NAME='J0605+3757'
	export JUPYTER_PLATFORM_DIRS=1 && jupyter --paths
	tree tests
	pytest tests/test_run_notebook.py -n auto -k $PULSAR_NAME
	mv tmp-* nb_outputs
	- name: Archive Notebook Output Files
	uses: actions/upload-artifact@v3
	with:
	name: TestNB-OutputFiles
	path: \|
	nb_outputs

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