I'm a Bioinformatics and Computational Biology professional with expertise in combining biology and big data analytics to support genomics-enabled research. Currently working as a Research Associate III in Bioinformatics at the Animal Disease Research & Diagnostic Laboratory, South Dakota State University.
- Next Generation Sequencing (NGS) data analysis
- Machine Learning in Bioinformatics
- Genomics and Transcriptomics
- Host-Pathogen Interactions
- Computational Systems Biology
- Programming Languages: Python, R, Perl
- Environments: Linux/Unix
- NGS Analysis: Genome Assembly, RNA-Seq, Small RNA Sequencing, Digenome
- Machine Learning: Deep Learning, Support Vector Machines, Neural Networks
- Bioinformatics Tools: CLC Genomics, BLAST, InterProScan, Gene Ontology
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Ph.D. in Plant Sciences (Bioinformatics and Computational Biology)
- Utah State University (2019-2023)
- Thesis: Machine learning and Data mining in complex genomics big data: developing efficient tools to advance computational systems biology
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M.Sc. in Bioinformatics
- Punjabi University Patiala, India (2008-2010)
- Thesis: In silico prediction of microRNA in Catharanthus roseus and their role in metabolomics
- Developed PRGminer: A deep learning tool for predicting resistance genes in plant defense mechanisms
- Created HuCoPIA: An atlas of Human vs. SARS-CoV-2 Interactome
- Multiple grants as Co-PI and Co-I for research in viral diseases and biosecurity
- Published research in prestigious journals including Frontiers in Plant Science and Viruses
Feel free to reach out for collaborations or just a chat about bioinformatics and computational biology!
"Using computational approaches to unlock the secrets of life"