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Development #150

Merged
merged 95 commits into from
May 23, 2024
Merged

Development #150

merged 95 commits into from
May 23, 2024

Commits on Sep 19, 2023

  1. fix clustering cutoff

    @tsheils
    tsheils committed Sep 19, 2023
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  2. fix tests

    @tsheils
    tsheils committed Sep 19, 2023
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  3. Merge pull request #114 from tsheils/development 

    Development
    @tsheils
    tsheils authored Sep 19, 2023
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  4. fix emrichment popup

    @tsheils
    tsheils committed Sep 19, 2023
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  5. Merge branch 'ncats:development' into development

    @tsheils
    tsheils authored Sep 19, 2023
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  6. Merge pull request #115 from tsheils/development 

    Development
    @tsheils
    tsheils authored Sep 19, 2023
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Commits on Oct 11, 2023

  1. fix download

    @tsheils
    tsheils committed Oct 11, 2023
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  2. Merge pull request #116 from tsheils/development 

    fix download
    @tsheils
    tsheils authored Oct 11, 2023
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  3. Update token name

    @bettyli037
    bettyli037 authored Oct 11, 2023
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  4. Merge pull request #118 from ncats/bettyli037-patch-1 

    feat: update token name for development branch
    @tsheils
    tsheils authored Oct 11, 2023
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Commits on Oct 16, 2023

  1. small change to trigger deployment

    Braisted committed Oct 16, 2023
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  2. Merge branch 'development' of https://github.com/ncats/RaMP-Client in… 

    …to development
    Braisted committed Oct 16, 2023
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  3. small change to trigger deployment

    Braisted committed Oct 16, 2023
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  4. small change for deployment

    Braisted committed Oct 16, 2023
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  5. Merge pull request #119 from ncats/dev_test 

    Dev test
    @johnbraisted
    johnbraisted authored Oct 16, 2023
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Commits on Oct 30, 2023

  1. initial commit for RaMP-DB v3.+

    @johnbraisted
    johnbraisted committed Oct 30, 2023
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  2. test_on_sqlite_branch

    @johnbraisted
    johnbraisted committed Oct 30, 2023
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  3. Merge pull request #121 from ncats/ramp_server_3_dev 

    Ramp server 3 dev
    @johnbraisted
    johnbraisted authored Oct 30, 2023
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  4. explicit RMariaDB::MariaDB() call in db.R

    @johnbraisted
    johnbraisted committed Oct 30, 2023
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  5. Merge pull request #122 from ncats/ramp_server_3_dev 

    explicit RMariaDB::MariaDB() call in db.R
    @johnbraisted
    johnbraisted authored Oct 30, 2023
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Commits on Oct 31, 2023

  1. update db.R for ramp v3.0, integer port for qa

    @johnbraisted
    johnbraisted committed Oct 31, 2023
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  2. mod to db.R for RaMP-DB package v3, needs db_port in config

    @johnbraisted
    johnbraisted committed Oct 31, 2023
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  3. Merge pull request #123 from ncats/ramp_server_3_dev 

    Ramp server 3 dev
    @johnbraisted
    johnbraisted authored Oct 31, 2023
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  4. update install.R to include BiocFileCache installation

    @johnbraisted
    johnbraisted committed Oct 31, 2023
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  5. Merge pull request #124 from ncats/ramp_server_3_dev 

    update install.R to include BiocFileCache installation
    @johnbraisted
    johnbraisted authored Oct 31, 2023
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Commits on Dec 19, 2023

  1. Update .travis.yml

    @tsheils
    tsheils authored Dec 19, 2023
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  2. Create build.yml

    @tsheils
    tsheils authored Dec 19, 2023
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  3. Merge pull request #125 from ncats/tsheils-patch-2 

    Create build.yml
    @tsheils
    tsheils authored Dec 19, 2023
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  4. Update build.yml

    @tsheils
    tsheils authored Dec 19, 2023
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  5. Update build.yml

    @tsheils
    tsheils authored Dec 19, 2023
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  6. Update build.yml

    @tsheils
    tsheils authored Dec 19, 2023
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  7. Update .travis.yml

    @tsheils
    tsheils authored Dec 19, 2023
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  8. Update .travis.yml

    @tsheils
    tsheils authored Dec 19, 2023
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Commits on Jan 12, 2024

  1. update to angular 17, prettify all files

    @tsheils
    tsheils committed Jan 12, 2024
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Commits on Jan 18, 2024

  1. convert to standalone components, revamp ngrx effects, remove ngrx fa… 

    …case, rewrite actions
    @tsheils
    tsheils committed Jan 18, 2024
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  2. fix header style and ngrx selector imports

    @tsheils
    tsheils committed Jan 18, 2024
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  3. update tsconfig

    @tsheils
    tsheils committed Jan 18, 2024
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Commits on Jan 19, 2024

  1. removing flex layout

    @tsheils
    tsheils committed Jan 19, 2024
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Commits on Jan 24, 2024

  1. implement angular flow control, fix some linting

    @tsheils
    tsheils committed Jan 24, 2024
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  2. Merge branch 'development' into development

    @tsheils
    tsheils authored Jan 24, 2024
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  3. Merge pull request #126 from tsheils/development 

    Development
    @tsheils
    tsheils authored Jan 24, 2024
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  4. fixing chemical enrichment, ui layout

    @tsheils
    tsheils committed Jan 24, 2024
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  5. Merge pull request #127 from tsheils/development 

    fixing chemical enrichment, ui layout
    @tsheils
    tsheils authored Jan 24, 2024
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Commits on Jan 25, 2024

  1. added 4 Rhea reaction endpoints

    @johnbraisted
    johnbraisted committed Jan 25, 2024
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  2. Merge pull request #128 from ncats/jb_rxn_plumbing 

    added 4 Rhea reaction endpoints
    @tsheils
    tsheils authored Jan 25, 2024
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Commits on Jan 26, 2024

  1. fix structure viewer injection token

    @tsheils
    tsheils committed Jan 26, 2024
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  2. comment in db.R

    @johnbraisted
    johnbraisted committed Jan 26, 2024
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  3. plumber parameter patch

    @johnbraisted
    johnbraisted committed Jan 26, 2024
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Commits on Jan 30, 2024

  1. Merge pull request #130 from ncats/jb_rxn_plumbing 

    plumber reaction endpoint parameter patch
    @tsheils
    tsheils authored Jan 30, 2024
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  2. minor mod to runRamp to trigger RaMP-DB package deployment

    @johnbraisted
    johnbraisted committed Jan 30, 2024
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Commits on Jan 31, 2024

  1. Merge pull request #131 from ncats/jb_rxn_plumbing 

    minor change to trigger deployment of RaMP-DB for API
    @tsheils
    tsheils authored Jan 31, 2024
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  2. all linting psses

    @tsheils
    tsheils committed Jan 31, 2024
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  3. Merge branch 'development' of github.com:tsheils/RaMP-Client into dev… 

    …elopment
    @tsheils
    tsheils committed Jan 31, 2024
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  4. Merge pull request #132 from tsheils/development 

    Development
    @tsheils
    tsheils authored Jan 31, 2024
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  5. tests passing

    @tsheils
    tsheils committed Jan 31, 2024
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  6. Merge branch 'testing' into development

    @tsheils
    tsheils committed Jan 31, 2024
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  7. Merge pull request #133 from tsheils/development 

    Development
    @tsheils
    tsheils authored Jan 31, 2024
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  8. updating swagger file and api

    @tsheils
    tsheils committed Jan 31, 2024
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  9. Merge pull request #134 from tsheils/development 

    updating swagger file and api
    @tsheils
    tsheils authored Jan 31, 2024
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Commits on Feb 1, 2024

  1. updating swagger file

    @tsheils
    tsheils committed Feb 1, 2024
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  2. Merge branch 'reactions' into development

    @tsheils
    tsheils committed Feb 1, 2024
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  3. Merge pull request #135 from tsheils/development 

    Development
    @tsheils
    tsheils authored Feb 1, 2024
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Commits on Mar 22, 2024

  1. start reactions and fix prerendering

    @tsheils
    tsheils committed Mar 22, 2024
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  2. test and lint passing, but not actually completing

    @tsheils
    tsheils committed Mar 22, 2024
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  3. Merge branch 'reactions' into development

    @tsheils
    tsheils committed Mar 22, 2024
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  4. Merge branch 'development' of github.com:tsheils/RaMP-Client into dev… 

    …elopment
    @tsheils
    tsheils committed Mar 22, 2024
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  5. Merge pull request #136 from tsheils/development 

    Development
    @tsheils
    tsheils authored Mar 22, 2024
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Commits on Mar 25, 2024

  1. fix enrichment download, lint and tests

    @tsheils
    tsheils committed Mar 25, 2024
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  2. Merge pull request #137 from tsheils/development 

    fix enrichment download, lint and tests
    @tsheils
    tsheils authored Mar 25, 2024
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Commits on Apr 17, 2024

  1. fix pathway downloads

    @tsheils
    tsheils committed Apr 17, 2024
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  2. Merge branch 'ncats:development' into development

    @tsheils
    tsheils authored Apr 17, 2024
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  3. Merge pull request #138 from tsheils/development 

    fix pathway analysis download
    @tsheils
    tsheils authored Apr 17, 2024
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Commits on Apr 23, 2024

  1. update Ramp to sqlite

    @tsheils
    tsheils committed Apr 23, 2024
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  2. Merge branch 'development' of github.com:tsheils/RaMP-Client into dev… 

    …elopment
    @tsheils
    tsheils committed Apr 23, 2024
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  3. Merge branch 'ncats:development' into development

    @tsheils
    tsheils authored Apr 23, 2024
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  4. Merge pull request #139 from tsheils/development 

    Development
    @tsheils
    tsheils authored Apr 23, 2024
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Commits on Apr 26, 2024

  1. fix download file

    @tsheils
    tsheils committed Apr 26, 2024
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  2. Merge branch 'ncats:development' into development

    @tsheils
    tsheils authored Apr 26, 2024
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  3. Merge pull request #140 from tsheils/development 

    Development
    @tsheils
    tsheils authored Apr 26, 2024
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  4. update api to build from ramp main

    @tsheils
    tsheils committed Apr 26, 2024
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  5. Merge pull request #141 from tsheils/development 

    update api to build from ramp main
    @tsheils
    tsheils authored Apr 26, 2024
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Commits on Apr 30, 2024

  1. Updated documentation in plumber.R and extensions.yml

    @andyptt21
    andyptt21 committed Apr 30, 2024
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  2. fix common reaction query

    @tsheils
    tsheils committed Apr 30, 2024
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  3. Merge pull request #142 from tsheils/development 

    fix common reaction query
    @johnbraisted
    johnbraisted authored Apr 30, 2024
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  4. updating plumber

    @tsheils
    tsheils committed Apr 30, 2024
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  5. Merge pull request #143 from tsheils/development 

    updating plumber
    @tsheils
    tsheils authored Apr 30, 2024
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Commits on May 2, 2024

  1. adjust models to split by commas instead of semicolon

    @tsheils
    tsheils committed May 2, 2024
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  2. Merge pull request #144 from tsheils/development 

    adjust models to split by commas instead of semicolon
    @tsheils
    tsheils authored May 2, 2024
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Commits on May 21, 2024

  1. Update runRamp.R

    @tsheils
    tsheils authored May 21, 2024
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  2. Merge branch 'development' into tsheils-patch-1

    @tsheils
    tsheils authored May 21, 2024
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  3. Merge pull request #146 from ncats/tsheils-patch-1 

    Update runRamp.R
    @tsheils
    tsheils authored May 21, 2024
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Commits on May 22, 2024

  1. Merge branch 'development' into ap_doc_update

    @tsheils
    tsheils authored May 22, 2024
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  2. Merge pull request #148 from ncats/ap_doc_update 

    Updated documentation in plumber.R and extensions.yml
    @tsheils
    tsheils authored May 22, 2024
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Commits on May 23, 2024

  1. pre-fetch the sqlite database for the Docker container

    @KeithKelleher
    KeithKelleher committed May 23, 2024
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  2. Merge pull request #149 from ncats/prefetch-sqlite-db 

    pre-fetch the sqlite database for the Docker container
    @tsheils
    tsheils authored May 23, 2024
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