v2.5.2

Update the RaMP R package functionality to use SQLite instead of a dedicated database.
Improve table views for pathway analysis.
Fix download from tables.

What's Changed

• Development by @tsheils in #114
• Development by @tsheils in #115
• fix download by @tsheils in #116
• feat: update token name for development branch by @bettyli037 in #118
• Dev test by @johnbraisted in #119
• Ramp server 3 dev by @johnbraisted in #121
• explicit RMariaDB::MariaDB() call in db.R by @johnbraisted in #122
• Ramp server 3 dev by @johnbraisted in #123
• update install.R to include BiocFileCache installation by @johnbraisted in #124
• Create build.yml by @tsheils in #125
• Development by @tsheils in #126
• fixing chemical enrichment, ui layout by @tsheils in #127
• added 4 Rhea reaction endpoints by @johnbraisted in #128
• plumber reaction endpoint parameter patch by @johnbraisted in #130
• minor change to trigger deployment of RaMP-DB for API by @johnbraisted in #131
• Development by @tsheils in #132
• Development by @tsheils in #133
• updating swagger file and api by @tsheils in #134
• Development by @tsheils in #135
• Development by @tsheils in #136
• fix enrichment download, lint and tests by @tsheils in #137
• fix pathway analysis download by @tsheils in #138
• Development by @tsheils in #139
• Development by @tsheils in #140
• update api to build from ramp main by @tsheils in #141
• fix common reaction query by @tsheils in #142
• updating plumber by @tsheils in #143
• adjust models to split by commas instead of semicolon by @tsheils in #144
• Update runRamp.R by @tsheils in #146
• Updated documentation in plumber.R and extensions.yml by @andyptt21 in #148
• pre-fetch the sqlite database for the Docker container by @KeithKelleher in #149
• Development by @tsheils in #150

New Contributors

• @KeithKelleher made their first contribution in #149

Full Changelog: v2.2.2...v2.5.2