Merge pull request #47 from ncats/RdataUpdate_2.2.1

Rdata update 2.2.1

DESCRIPTION

@@ -1,7 +1,7 @@
 Package: RaMP
 Title: RaMP (Relational Database of Metabolomic Pathways)
 Type: Package
-Version: 2.2.0
+Version: 2.2.1
 License: GPL-2
 Depends: R (>= 3.6.0)
 Authors@R: c(

R/processNewRamp.R

@@ -456,7 +456,7 @@ processData <- function(){
 #
 #
 #   #uncomment usethis::use_data function to create sysdata.rda object
-#   rampdb_version = 'v2.0.6'
+#   rampdb_version = 'v2.2.1'
 #   usethis::use_data(genes_result,
 #                      metabolites_result,
 #                      analyte_result,
@@ -487,6 +487,7 @@ processData <- function(){
 
 # run these 3 methods, these generate files in the R RaMP library area
 # if commiting to git, then copy the new files into your R git project inst/extdata
+
 # pkg.globals <- setConnectionToRaMP(dbname=dbname,username=username,conpass=conpass,host=hostname)
 # RaMP:::updateOverlapMatrices(method="balanced" ,all="all")
 # RaMP:::updateOverlapMatrices(method="balanced" ,all="analyte")

README.md

@@ -58,7 +58,7 @@ To access, [click here](https://www.mdpi.com/2218-1989/8/1/16)
 ## Installation Instructions
 In order to use this R package locally, you will need the following:
 * The R code under this repo
-* The mysql dump file that contains the RaMP database. **[Download here](https://figshare.com/ndownloader/files/38534654).**
+* The mysql dump file that contains the RaMP database. **[Download here](https://figshare.com/ndownloader/files/39460683).**
 
 
 If you would like to know how to build RaMP database from scratch, please check another GitHub site at [RaMP-BackEnd](https://github.com/ncats/RaMP-BackEnd)
@@ -86,7 +86,7 @@ mysql> exit;
 
 Here, we are naming the database "ramp" but you can use any name you'd like.  It is worth noting though that the R package assumes that the name of the database is "ramp" by default.  So if you change the name, remember to pass that name as arguments in the R package functions.
 
-Second, download and unzip the latest RaMP database. **[Download here](https://figshare.com/ndownloader/files/38534654).**
+Second, download and unzip the latest RaMP database. **[Download here](https://figshare.com/ndownloader/files/39460683).**
 
 
 Third, populate the named database with the mysql dump file