…plot chart key; now the reset button works as expected, but the chart still resets its zoom if anything such as selection or slider changing etc. modifies the selected region. If I pursue this as users probably want, it would require the original idea of toggling the plotly box selection between a zoom, i.e. manually setting it, and the actual histogram region selection functionality which is already implemented

…ion of positive region of the histogram(s) or the x axis zoom

…lumn for filtering is changed

…PU when Squidpy is selected since it commandeers threads; in future we'll need to limit just the significance calculations to a single thread if Squidpy is selected

…aframes in Streamlit, to replace previous image filters such as in the multiaxial gater and probably in the plotter-based pages such as the scatter plotter and the draft radial profiles page

…ghbors counts

Removing Neighborhood Profiles checkpointing

…ofiles

Andrew intended to make the default condition for the umap subset to be true. The change in this commit will make the intention true

Something weird is going on with palantir library. Taking this out for the time being

…rror

QoL changes for MAWA/Neighborhood Profiles

Hard setting cpu_pool_size = 3 for clustering

…erformed as expected

Only want this to run when its toggle_clust_diff and when its also a appro_feat

This only solves half the problem. I think I can make the rest of it work too

…ld calculation for the box and whisker plots. This allows e.g. to use T=0 mean and std in the plots for the entire dataset

Didnt solve all my problems. Making a simple variable to check for the kind of clustering being completed

So that we can see feedback message

Adding mp_start_method to match utils.execute_data_parallelism_potentially

I think this is what Andrew wanted. Lets give this a go

Trying a direct call of the utils function

…ing script

…p to the plot in the radial profiles app but not in the scatter plotter

…thing updates a plotly figure by rendering some output (st.toggle() works too) after the plotly figure is rendered

…since we currently did not perform the conversion in the unifier

Automatically calculate the midpoint of each image

Calculate evenly spaced radii from the midpoint to at most include the largest possible radius

Plot the radii on the image

In the scatter plotter, exit cleanly if the input dataset does not exist

…ry visual inspection

Too many calls to a function and things got lost along the way

…eems to be good, 6M cells take 20 sec to run

… and CIs of a selected set of images; basically just have to do plotting now, no more calculations

…te a single function that detects the radial bin for each cell

Improved method for checking the values within a column and determining if we can split it before clustering

Adding Feature separation for difference clustering

Fixing a bug related to drawing 0 values on log scale

…diately tries to use the scatter plotter