Merge pull request #61 from KeithKelleher/master

February release updates
ncats · Feb 28, 2021 · 081d6d3 · 081d6d3
2 parents 6df84d6 + d1599c2
commit 081d6d3
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diff --git a/README.md b/README.md
@@ -1,12 +1,25 @@
 Pharos graphql server
 =====================
 
-To run
+###To run
 
 Run `npm install` to get all dependencies, then
 
 ```
 npm start
 ```
 
-A public instance of this api is available [here](https://pharos-api.ncats.io/graphql).
+A public instance of this DEV version of the api is available [here](https://ncatsidg-dev.appspot.com/graphql).
+
+
+
+### To deploy on gcloud
+* go to project on g cloud
+* "git clone https://github.com/ncats/pharos-graphql-server"
+    * "git pull" if it's already there
+* cd to dir
+* export PORT=8080 && npm install
+* npm start          									  -- preview
+* gcloud app create   								  -- first time only
+* gcloud app deploy
+
diff --git a/package.json b/package.json
@@ -4,7 +4,7 @@
   "description": "",
   "main": "src/index.js",
   "scripts": {
-    "test" : "node src/index.js & jest",
+    "test" : "node src/index.js & (sleep 10 && jest)",
     "start" : "nodemon src/index.js",
     "start:ci" : "tsc && node src/index.js",
     "gcp-build" : "tsc -p ."

diff --git a/pharos_database_transforms/README.md b/pharos_database_transforms/README.md
@@ -8,7 +8,7 @@ TCRD Update Instructions :smiley_cat:
    terminal > ssh ifxdev.ncats.nih.gov
         <enter password>
    [ifxdev] $ curl -o tcrd6.6.0.sql.gz http://juniper.health.unm.edu/tcrd/download/TCRDv6.6.0.sql.gz
-        (about 12 minutes)
+        (about 12 - 18 minutes)
    [ifxdev] $ gunzip tcrd6.6.0.sql.gz
         (about 2 minutes)
     ```

diff --git a/pharos_database_transforms/dataSourceMappings.py b/pharos_database_transforms/dataSourceMappings.py
diff --git a/pharos_database_transforms/facets.csv b/pharos_database_transforms/facets.csv
diff --git a/pharos_database_transforms/pharos-create-facet-table.py b/pharos_database_transforms/pharos-create-facet-table.py
diff --git a/pharos_database_transforms/tcrd-add-pharos-name.py b/pharos_database_transforms/tcrd-add-pharos-name.py
diff --git a/pharos_database_transforms/tcrd-create-datasource-table.py b/pharos_database_transforms/tcrd-create-datasource-table.py
diff --git a/pharos_database_transforms/tcrd-create-datasource-table.sql b/pharos_database_transforms/tcrd-create-datasource-table.sql