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Lower DPI for vignette images to fix CRAN errors and notes #323

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merged 5 commits into from
Feb 15, 2025

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@brownag brownag commented Feb 15, 2025

It seems that #322 is not sufficient to clear the biggest errors in the CRAN checks related to large image sizes. The most recent submission was rejected. While "noSuggests" is certainly a significant additional issue, it appears that the total package size due to images is a bigger one, triggering ERROR on six platforms (e.g. https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/aqp-00check.html)

CRAN check gives the following hard errors when building vignettes. The output is indicating that with better compression or image output options, the PNG images could be reduced in size by ~20 - 30%.

checking re-building of vignette outputs ... [74s/101s] ERROR
Error(s) in re-building vignettes:
  ...
--- re-building ‘Introduction-to-SoilProfileCollection-Objects.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-1-1.png
576x288 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 8023 bytes
Input file size = 8881 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 7095
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 7095

Output IDAT size = 7095 bytes (928 bytes decrease)
Output file size = 7173 bytes (1708 bytes = 19.23% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-13-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15525 bytes
Input file size = 15615 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 14943
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 13613
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 13613

Output IDAT size = 13613 bytes (1912 bytes decrease)
Output file size = 13691 bytes (1924 bytes = 12.32% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-14-1.png
768x384 pixels, 8 bits/pixel, 228 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 3931 bytes
Input file size = 4705 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 3258
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 3220
  zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 3202
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 1  f = 5		IDAT size = 3202

Output IDAT size = 3202 bytes (729 bytes decrease)
Output file size = 3280 bytes (1425 bytes = 30.29% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-15-1.png
768x384 pixels, 8 bits/pixel, 255 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 6217 bytes
Input file size = 7072 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 5167
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 5167

Output IDAT size = 5167 bytes (1050 bytes decrease)
Output file size = 5245 bytes (1827 bytes = 25.83% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-15-2.png
768x384 pixels, 8 bits/pixel, 230 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 3302 bytes
Input file size = 4082 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 2642
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 2642

Output IDAT size = 2642 bytes (660 bytes decrease)
Output file size = 2720 bytes (1362 bytes = 33.37% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-16-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46001 bytes
Input file size = 46139 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36872
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36872

Output IDAT size = 36872 bytes (9129 bytes decrease)
Output file size = 36950 bytes (9189 bytes = 19.92% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-17-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 45912 bytes
Input file size = 46050 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 37017
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 37017

Output IDAT size = 37017 bytes (8895 bytes decrease)
Output file size = 37095 bytes (8955 bytes = 19.45% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-18-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 45467 bytes
Input file size = 45605 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36582
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36582

Output IDAT size = 36582 bytes (8885 bytes decrease)
Output file size = 36660 bytes (8945 bytes = 19.61% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-19-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 38540 bytes
Input file size = 38666 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 31790
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 31790

Output IDAT size = 31790 bytes (6750 bytes decrease)
Output file size = 31868 bytes (6798 bytes = 17.58% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-20-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 45848 bytes
Input file size = 45986 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 35960
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 35960

Output IDAT size = 35960 bytes (9888 bytes decrease)
Output file size = 36038 bytes (9948 bytes = 21.63% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-21-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 45469 bytes
Input file size = 45607 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36820
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36820

Output IDAT size = 36820 bytes (8649 bytes decrease)
Output file size = 36898 bytes (8709 bytes = 19.10% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-22-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43179 bytes
Input file size = 43317 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34988
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 34988

Output IDAT size = 34988 bytes (8191 bytes decrease)
Output file size = 35066 bytes (8251 bytes = 19.05% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-24-1.png
480x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 12530 bytes
Input file size = 12620 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11122
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 11122

Output IDAT size = 11122 bytes (1408 bytes decrease)
Output file size = 11200 bytes (1420 bytes = 11.25% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-25-1.png
672x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 18160 bytes
Input file size = 18262 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16692
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 16436
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 16436

Output IDAT size = 16436 bytes (1724 bytes decrease)
Output file size = 16514 bytes (1748 bytes = 9.57% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-26-1.png
768x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21885 bytes
Input file size = 21987 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20797
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 20138
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 20138

Output IDAT size = 20138 bytes (1747 bytes decrease)
Output file size = 20216 bytes (1771 bytes = 8.05% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-27-1.png
768x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24576 bytes
Input file size = 24678 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 22462
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 22462

Output IDAT size = 22462 bytes (2114 bytes decrease)
Output file size = 22540 bytes (2138 bytes = 8.66% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-28-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 47225 bytes
Input file size = 47363 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 37823
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 37823

Output IDAT size = 37823 bytes (9402 bytes decrease)
Output file size = 37901 bytes (9462 bytes = 19.98% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-29-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 45235 bytes
Input file size = 45373 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36722
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 36722

Output IDAT size = 36722 bytes (8513 bytes decrease)
Output file size = 36800 bytes (8573 bytes = 18.89% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-30-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 47080 bytes
Input file size = 47218 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 38007
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 38007

Output IDAT size = 38007 bytes (9073 bytes decrease)
Output file size = 38085 bytes (9133 bytes = 19.34% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-31-1.png
864x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 47387 bytes
Input file size = 47525 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 38113
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 38113

Output IDAT size = 38113 bytes (9274 bytes decrease)
Output file size = 38191 bytes (9334 bytes = 19.64% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-32-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 22653 bytes
Input file size = 22755 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20138
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20138

Output IDAT size = 20138 bytes (2515 bytes decrease)
Output file size = 20216 bytes (2539 bytes = 11.16% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-33-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 22652 bytes
Input file size = 22754 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20136
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20136

Output IDAT size = 20136 bytes (2516 bytes decrease)
Output file size = 20214 bytes (2540 bytes = 11.16% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-34-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23298 bytes
Input file size = 23400 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20418
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20418

Output IDAT size = 20418 bytes (2880 bytes decrease)
Output file size = 20496 bytes (2904 bytes = 12.41% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-35-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21212 bytes
Input file size = 21314 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18418
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 18418

Output IDAT size = 18418 bytes (2794 bytes decrease)
Output file size = 18496 bytes (2818 bytes = 13.22% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/plotting-vol-fraction-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 105637 bytes
Input file size = 105859 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 85224
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 85224

Output IDAT size = 85224 bytes (20413 bytes decrease)
Output file size = 85302 bytes (20557 bytes = 19.42% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-36-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19523 bytes
Input file size = 19625 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16919
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 16919

Output IDAT size = 16919 bytes (2604 bytes decrease)
Output file size = 16997 bytes (2628 bytes = 13.39% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-37-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27584 bytes
Input file size = 27698 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 23146
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 23146

Output IDAT size = 23146 bytes (4438 bytes decrease)
Output file size = 23224 bytes (4474 bytes = 16.15% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-38-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29343 bytes
Input file size = 29457 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24372
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24372

Output IDAT size = 24372 bytes (4971 bytes decrease)
Output file size = 24450 bytes (5007 bytes = 17.00% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-39-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23780 bytes
Input file size = 23882 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20296
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20296

Output IDAT size = 20296 bytes (3484 bytes decrease)
Output file size = 20374 bytes (3508 bytes = 14.69% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-40-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29446 bytes
Input file size = 29560 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24857
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24857

Output IDAT size = 24857 bytes (4589 bytes decrease)
Output file size = 24935 bytes (4625 bytes = 15.65% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-41-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29289 bytes
Input file size = 29403 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24504
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 24504

Output IDAT size = 24504 bytes (4785 bytes decrease)
Output file size = 24582 bytes (4821 bytes = 16.40% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-42-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23458 bytes
Input file size = 23560 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19674
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19674

Output IDAT size = 19674 bytes (3784 bytes decrease)
Output file size = 19752 bytes (3808 bytes = 16.16% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/profileApply-4-1.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31277 bytes
Input file size = 31391 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26940
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26940

Output IDAT size = 26940 bytes (4337 bytes decrease)
Output file size = 27018 bytes (4373 bytes = 13.93% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-44-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 39469 bytes
Input file size = 39595 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 31073
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 31073

Output IDAT size = 31073 bytes (8396 bytes decrease)
Output file size = 31151 bytes (8444 bytes = 21.33% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-46-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 25419 bytes
Input file size = 25533 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21749
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21749

Output IDAT size = 21749 bytes (3670 bytes decrease)
Output file size = 21827 bytes (3706 bytes = 14.51% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-47-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24886 bytes
Input file size = 25000 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21622
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21622

Output IDAT size = 21622 bytes (3264 bytes decrease)
Output file size = 21700 bytes (3300 bytes = 13.20% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/slab-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64054 bytes
Input file size = 64216 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 48306
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 48306

Output IDAT size = 48306 bytes (15748 bytes decrease)
Output file size = 48384 bytes (15832 bytes = 24.65% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/slab-2-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 64099 bytes
Input file size = 64261 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 49716
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 49716

Output IDAT size = 49716 bytes (14383 bytes decrease)
Output file size = 49794 bytes (14467 bytes = 22.51% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-49-1.png
864x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33248 bytes
Input file size = 33374 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30210
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30210

Output IDAT size = 30210 bytes (3038 bytes decrease)
Output file size = 30288 bytes (3086 bytes = 9.25% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Introduction-to-SoilProfileCollection-Objects_files/figure-html/unnamed-chunk-50-1.png
864x672 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35386 bytes
Input file size = 35512 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 31870
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 31870

Output IDAT size = 31870 bytes (3516 bytes decrease)
Output file size = 31948 bytes (3564 bytes = 10.04% decrease)

--- finished re-building ‘Introduction-to-SoilProfileCollection-Objects.Rmd’

--- re-building ‘Munsell-color-conversion.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/Munsell-color-conversion_files/figure-html/unnamed-chunk-1-1.png
768x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19108 bytes
Input file size = 19210 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 15794
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 15794

Output IDAT size = 15794 bytes (3314 bytes decrease)
Output file size = 15872 bytes (3338 bytes = 17.38% decrease)

--- finished re-building ‘Munsell-color-conversion.Rmd’

--- re-building ‘NCSP.Rmd’ using rmarkdown

Quitting from lines 39-47 [unnamed-chunk-1] (NCSP.Rmd)
Error: processing vignette 'NCSP.Rmd' failed with diagnostics:
there is no package called 'sharpshootR'
--- failed re-building ‘NCSP.Rmd’

--- re-building ‘aqp-overview.Rmd’ using rmarkdown
--- finished re-building ‘aqp-overview.Rmd’

--- re-building ‘label-placement.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-1-1.png
576x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 20466 bytes
Input file size = 20568 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17715
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17715

Output IDAT size = 17715 bytes (2751 bytes decrease)
Output file size = 17793 bytes (2775 bytes = 13.49% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-3-1.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34749 bytes
Input file size = 34875 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30907
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30907

Output IDAT size = 30907 bytes (3842 bytes decrease)
Output file size = 30985 bytes (3890 bytes = 11.15% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-4-1.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 41873 bytes
Input file size = 42011 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 35785
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 35785

Output IDAT size = 35785 bytes (6088 bytes decrease)
Output file size = 35863 bytes (6148 bytes = 14.63% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-5-1.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 43172 bytes
Input file size = 43310 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 37037
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 37037

Output IDAT size = 37037 bytes (6135 bytes decrease)
Output file size = 37115 bytes (6195 bytes = 14.30% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-8-1.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 50618 bytes
Input file size = 50768 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 40145
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 40145

Output IDAT size = 40145 bytes (10473 bytes decrease)
Output file size = 40223 bytes (10545 bytes = 20.77% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-9-1.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 124908 bytes
Input file size = 125166 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 99412
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 99412

Output IDAT size = 99412 bytes (25496 bytes decrease)
Output file size = 99490 bytes (25676 bytes = 20.51% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-9-2.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 123231 bytes
Input file size = 123489 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 97635
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 97635

Output IDAT size = 97635 bytes (25596 bytes decrease)
Output file size = 97713 bytes (25776 bytes = 20.87% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-9-3.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 121010 bytes
Input file size = 121256 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 94532
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 94532

Output IDAT size = 94532 bytes (26478 bytes decrease)
Output file size = 94610 bytes (26646 bytes = 21.97% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-9-4.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 119360 bytes
Input file size = 119606 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 93214
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 93214

Output IDAT size = 93214 bytes (26146 bytes decrease)
Output file size = 93292 bytes (26314 bytes = 22.00% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-9-5.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 120557 bytes
Input file size = 120803 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 94004
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 94004

Output IDAT size = 94004 bytes (26553 bytes decrease)
Output file size = 94082 bytes (26721 bytes = 22.12% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-9-6.png
768x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 123059 bytes
Input file size = 123317 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 96891
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 96891

Output IDAT size = 96891 bytes (26168 bytes decrease)
Output file size = 96969 bytes (26348 bytes = 21.37% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-13-1.png
816x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 86006 bytes
Input file size = 86204 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 68805
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 68805

Output IDAT size = 68805 bytes (17201 bytes decrease)
Output file size = 68883 bytes (17321 bytes = 20.09% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-13-2.png
816x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 110143 bytes
Input file size = 110377 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 87910
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 87910

Output IDAT size = 87910 bytes (22233 bytes decrease)
Output file size = 87988 bytes (22389 bytes = 20.28% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-13-3.png
816x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 220138 bytes
Input file size = 220528 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 216404
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 205777
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 205777

Output IDAT size = 205777 bytes (14361 bytes decrease)
Output file size = 205855 bytes (14673 bytes = 6.65% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-13-4.png
816x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 221090 bytes
Input file size = 221480 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 212356
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 212356

Output IDAT size = 212356 bytes (8734 bytes decrease)
Output file size = 212434 bytes (9046 bytes = 4.08% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-13-5.png
816x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 236522 bytes
Input file size = 236936 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 227131
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 5		IDAT size = 227131

Output IDAT size = 227131 bytes (9391 bytes decrease)
Output file size = 227209 bytes (9727 bytes = 4.11% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-16-1.png
768x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 69815 bytes
Input file size = 69989 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57736
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 57736

Output IDAT size = 57736 bytes (12079 bytes decrease)
Output file size = 57814 bytes (12175 bytes = 17.40% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/label-placement_files/figure-html/unnamed-chunk-17-1.png
768x576 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 152296 bytes
Input file size = 152590 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 134199
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 134199

Output IDAT size = 134199 bytes (18097 bytes decrease)
Output file size = 134277 bytes (18313 bytes = 12.00% decrease)

--- finished re-building ‘label-placement.Rmd’

--- re-building ‘missing-data.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-2-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27958 bytes
Input file size = 28072 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21700
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 21700

Output IDAT size = 21700 bytes (6258 bytes decrease)
Output file size = 21778 bytes (6294 bytes = 22.42% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-2-2.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 22671 bytes
Input file size = 22773 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17118
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 17118

Output IDAT size = 17118 bytes (5553 bytes decrease)
Output file size = 17196 bytes (5577 bytes = 24.49% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-2-3.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24690 bytes
Input file size = 24804 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19070
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 19070

Output IDAT size = 19070 bytes (5620 bytes decrease)
Output file size = 19148 bytes (5656 bytes = 22.80% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-2-4.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26119 bytes
Input file size = 26233 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20096
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 20096

Output IDAT size = 20096 bytes (6023 bytes decrease)
Output file size = 20174 bytes (6059 bytes = 23.10% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-2-5.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34129 bytes
Input file size = 34255 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26278
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26278

Output IDAT size = 26278 bytes (7851 bytes decrease)
Output file size = 26356 bytes (7899 bytes = 23.06% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-3-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35597 bytes
Input file size = 35723 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28617
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28617

Output IDAT size = 28617 bytes (6980 bytes decrease)
Output file size = 28695 bytes (7028 bytes = 19.67% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-3-2.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35272 bytes
Input file size = 35398 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28219
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28219

Output IDAT size = 28219 bytes (7053 bytes decrease)
Output file size = 28297 bytes (7101 bytes = 20.06% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-3-3.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 35384 bytes
Input file size = 35510 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28475
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 28475

Output IDAT size = 28475 bytes (6909 bytes decrease)
Output file size = 28553 bytes (6957 bytes = 19.59% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-3-4.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 34577 bytes
Input file size = 34703 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 27005
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 27005

Output IDAT size = 27005 bytes (7572 bytes decrease)
Output file size = 27083 bytes (7620 bytes = 21.96% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-3-5.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 33360 bytes
Input file size = 33486 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25549
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 25549

Output IDAT size = 25549 bytes (7811 bytes decrease)
Output file size = 25627 bytes (7859 bytes = 23.47% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-3-6.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 37922 bytes
Input file size = 38048 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 29258
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 29258

Output IDAT size = 29258 bytes (8664 bytes decrease)
Output file size = 29336 bytes (8712 bytes = 22.90% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-3-7.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 40643 bytes
Input file size = 40769 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30504
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 30504

Output IDAT size = 30504 bytes (10139 bytes decrease)
Output file size = 30582 bytes (10187 bytes = 24.99% decrease)

** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/aqp.Rcheck/vign_test/aqp/vignettes/missing-data_files/figure-html/unnamed-chunk-3-8.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 41984 bytes
Input file size = 42122 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 31438
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 31438

Output IDAT size = 31438 bytes (10546 bytes decrease)
Output file size = 31516 bytes (10606 bytes = 25.18% decrease)

I have never seen this check trigger before, and can find no information or instances of it occurring on Google other than in the aqp check log. It appears to be targeting the rather large "doc" directory generated in the package after building vignettes. Lowering the DPI in all vignettes to 48 (dots per inch) gets the "doc" directory down well below 1MB compared to the currrent 1.6MB (see #322 (comment))

We still exceed the suggested installed size in CRAN repository policy by about 200kB, but the "doc" folder is not flagged in this NOTE

❯ checking installed package size ... NOTE
    installed size is  5.2Mb
    sub-directories of 1Mb or more:
      R      1.2Mb
      data   2.1Mb

Going to 32 DPI for all vignettes (ad41a98) gets the whole package down below 5 MB and clears the NOTE. There are, of course, other places we could optimize package size, but it seems these images are the target of new scrutiny. IMO they really aren't that important to the overall package function or vignette content, the users can run the code locally to generate full resolution images if they follow the vignette instructions.

We should make moves to correct this issue at a minimum to clear the errors and keep the package on CRAN, then we can deal with other areas for optimization in a near-future release.

I suggest that in the interim we implement a much lower DPI on CRAN. The only alternative I see is if we can introduce some sort of compression, or use a different format e.g. JPEG, to make higher DPI images sufficiently small. These options also have drawbacks.

We can make the lowered DPI setting conditional when we build the GitHub Pages site (https://ncss-tech.github.io/aqp/) so that the small/harder-to-read images are only generated in the CRAN vignette builds, whereas our website has full resolution.

One possible alternative option allowing us to keep something like the current settings might be to use the OptiPNG knitr hook: https://bookdown.org/yihui/rmarkdown-cookbook/optipng.html. We would need to check with maintainers to confirm it would work on CRAN, it appears that they are using this tool to run the checks on PNGs that are causing ERRORs. While we could potentially provide local builds of vignettes in lieu of CRAN building them--using this external tool would probably not be workable on CCE devices.

@brownag
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brownag commented Feb 15, 2025

In my testing, replacing the dpi knitr chunk option with optipng = knitr::hook_optipng does not clear the NOTE or optimize the images on my work machine, which does not have OptiPNG installed, but it does run without error. If this tool is available on CRAN it might resolve our issues without having to rely on dramatically reduced DPI/image quality.

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brownag commented Feb 15, 2025

The actual error in vignette building is probably just related to sharpshootR, not the image compression, which should be resolved by #322. Regardless it would be a good idea to get the package below 5MB per CRAN guidelines.

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OK Thanks. I'm fine with the lower-res images for now, maybe there is a way to preserve the higher quality stuff on the website. That is where most people (I think) will be reading these articles.

On a related note, I'm going to move MASS into imports, as I've got additional reasons to use that package in the future.

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brownag commented Feb 15, 2025

maybe there is a way to preserve the higher quality stuff on the website. That is where most people (I think) will be reading these articles.

Agreed. My approach to this would be to set an environment variable in the gh-pages build action, e.g. R_AQP_VIGNETTE_IMAGE_DPI, and use that in the knitr chunk option. In lieu of that, fall back to a small value (i.e. 32 in this PR) to keep the package below the NOTE threshold.

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brownag commented Feb 15, 2025

So, MASS depends on R 4.4.0+... so if you import it you will need to bump the minimum R version aqp relies on. I am not sure that is a good idea.

Since it appears the only actual usage of it is in the rarely-used evalGenHz(), and I assume you are hitting errors just with the test/example function, I would strongly suggest using only Suggests, just add skip_if_not_installed("MASS") to the tests that call evalGenHZ and leave imports alone.

Notwithstanding future plans, I think at this point it is a tall order to require R 4.4.0 for soilDB and packages that suggest it...

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brownag commented Feb 15, 2025

I implemented the environment variable solution for DPI in a476432

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Nice idea for the variable res output. I think that dropping MASS may be the last TODO before trying another CRAN submission. Waiting for windbuilder to report back on the latest changes.

@dylanbeaudette dylanbeaudette merged commit 238e9d6 into master Feb 15, 2025
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2 participants