Fix rendering of final plot

neurogenomics · Dec 18, 2024 · 5dca755 · 5dca755
1 parent e350355
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diff --git a/NEWS.md b/NEWS.md
@@ -3,6 +3,8 @@
 ## Bug fixes
 
 * Fix tests expecting fixed number of phenotypes.
+* Vignette
+  - `HPOExplorer`: Fix rendering of final plot.
 
 # HPOExplorer 1.0.3
 

diff --git a/man/hpo_to_matrix.Rd b/man/hpo_to_matrix.Rd
diff --git a/vignettes/HPOExplorer.Rmd b/vignettes/HPOExplorer.Rmd
@@ -80,7 +80,7 @@ The `colour_var` argument is where you choose the column name from the `phenos`
 ```{r plot, warning = FALSE, message = FALSE, fig.width = 9, fig.height = 7}
 plt <- make_network_plot(phenos = phenos, 
                          colour_var = "ontLvl_geneCount_ratio")
-methods::show(plt)
+plt$plot
 ```