old version of js files

neuroneural · Feb 3, 2024 · a71897e · a71897e
1 parent 7f5c0ac
commit a71897e
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Showing 3 changed files with 800 additions and 2,316 deletions.
diff --git a/js/brainchop/connectedComponents3DAll.js b/js/brainchop/connectedComponents3DAll.js
@@ -541,65 +541,6 @@ class ConnectCompFor3D extends ConnectCompFor2D {
           return  label3D;              
     }
 
-    // For future use
-
-    getConComponentsFor3DVolumeWithTimer = async(volumeSlices, sliceHeight, sliceWidth) => {
-
-        const self = this;
-
-        return new Promise((resolve, reject) => {
-              document.getElementById("progressBarChild").parentElement.style.visibility = "visible";
-              document.getElementById("progressBarChild").style.width = 0;
-
-              let binaryMaskData1D = [];
-              let binaryMaskData2D = [];     
-              let label3D = [];
-
-              let sliceIdx = 0;           
-
-              let ccTimer = window.setInterval(function() {
-
-                  binaryMaskData1D[sliceIdx] = getBinaryMaskData1D(volumeSlices[sliceIdx]); // binaryMaskData1D has values 0 or 1 
-                  binaryMaskData2D[sliceIdx] = convertBinaryDataTo2D(binaryMaskData1D[sliceIdx], sliceHeight, sliceWidth);
-
-                  if(sliceIdx == 0) {
-                        //Only called for once at begining with first slice
-                      label3D[sliceIdx] = self.getConComponentsFor2D(binaryMaskData2D[sliceIdx], sliceHeight, sliceWidth);
-
-                  } else {
-                      label3D[sliceIdx] = self._getConComponentsFor2Slices(binaryMaskData2D[sliceIdx], label3D[sliceIdx - 1], sliceHeight, sliceWidth);
-                  }
-
-
-                  if(sliceIdx == (volumeSlices.length -1)) {
-                      document.getElementById("progressBarChild").style.width = 0;
-                      window.clearInterval( ccTimer );
-
-                      // 3d connected components third pass
-                      for(let sliceIdx = 0; sliceIdx < volumeSlices.length; sliceIdx++) {
-                          let row, col;
-                          for(row = 0; row < sliceHeight; row++) {
-                              for(col = 0; col < sliceWidth; col++) {
-
-                                 if( label3D[sliceIdx][row][col] != 0) {
-                                      label3D[sliceIdx][row][col] = self._equivalenceTabel[label3D[sliceIdx][row][col]];
-                                 }
-                              }
-                          }  
-                      } 
-
-                      resolve(label3D);
-                  }
-
-                  sliceIdx++;
-                  document.getElementById("progressBarChild").style.width = (sliceIdx + 1)*100/volumeSlices.length + "%";
-
-              }, 10); // timer delay
-
-        })           
-    }
-
-
 
     /**
     * Get connected components For a Volume of 2 slices, current slice and previous slice.-- (refine)
@@ -702,10 +643,9 @@ class ConnectCompFor3D extends ConnectCompFor2D {
      findLargest3dRegion = (volumeSlices, sliceHeight, sliceWidth) => {
 
           let label3D = [];  
-       
+
           label3D = this.getConComponentsFor3DVolume(volumeSlices, sliceHeight, sliceWidth);
-          //-- label3D = await this.getConComponentsFor3DVolumeWithTimer(volumeSlices, sliceHeight, sliceWidth);
-
+
           // Filter only largest volumetric 3d region with the most voxels of same label and remove noisy smaller 3d regions 
           let maxVolumeLabel =  this.getMostFreqVolumeLabel3D(label3D, sliceHeight, sliceWidth, volumeSlices.length);