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neuropoly / intranet.neuro.polymtl.ca Public

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Centralize derivatives conventions for BIDS datasets#94

Merged

valosekj merged 17 commits intomasterneuropoly/intranet.neuro.polymtl.ca:masterfrom jv/centralize_derivatives_convectionneuropoly/intranet.neuro.polymtl.ca:jv/centralize_derivatives_convectionCopy head branch name to clipboard

Jan 31, 2023

+83-4

Conversation Commits17 (17)Checks Files changed

Commits

Commits on Jan 24, 2023

Describe neuropoly-specific BIDS entities, like acq-cspine or acq-MTon
valosekj
committed
Add link to https://github.com/spinalcordtoolbox/manual-correction
valosekj
committed
Describe derivatives structure in details
valosekj
committed
Add pontomedullary junction (PMJ) label
valosekj
committed
Describe label-<region>_mask.nii.gz
valosekj
committed
Update MT convention to flip-<index>_mt-<on|off>
valosekj
committed
Fix typo
valosekj
committed
Add a brief description to label-disc.nii.gz, label-pmj.nii.gz, and label-compression.nii.gz
valosekj
committed
Include link to BIDS website
valosekj
committed
Switch from {note} formatting to "emoji".
valosekj
committed

Commits on Jan 25, 2023

Clarify that label-<region>_probseg.nii.gz represents soft seg.
valosekj
committed
Update data/dataset-curation.md

sandrinebedard
and
valosekj
authored

Commits on Jan 31, 2023

Add warning that preprocessing steps have to be described in README.md
valosekj
committed
Add 'brain' to region options
valosekj
committed
Switch to Admonitions syntax
valosekj
committed
Remove MT conversion table
valosekj
committed
Add link to BIDS derivatives convention
valosekj
committed

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