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Merge pull request #97
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fusion of all configuration files in `configuration_config.yml`
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maxradx authored Nov 2, 2024
2 parents 8c6d061 + e88c004 commit d2714db
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Showing 7 changed files with 329 additions and 392 deletions.
515 changes: 225 additions & 290 deletions SlicerCART/src/SlicerCART.py

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42 changes: 0 additions & 42 deletions SlicerCART/src/classification_config.yml

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104 changes: 104 additions & 0 deletions SlicerCART/src/configuration_config.yml
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KEYBOARD_SHORTCUTS:
- button: pushButton_ToggleFill
callback: toggleFillButton
shortcut: f
- button: pushButton_ToggleVisibility
callback: onPushButton_ToggleVisibility
shortcut: v
- button: pushButton_undo
callback: onPushButton_undo
shortcut: z
- button: SaveSegmentationButton
callback: onSaveSegmentationButton
shortcut: s
- button: pushButton_Smooth
callback: onPushButton_Smooth
shortcut: l
- button: pushButton_Small_holes
callback: onPushButton_Small_holes
shortcut: o
- button: pushButton_Interpolate
callback: onPushButton_Interpolate
shortcut: i
checkboxes:
Anoxic_injury_checkbox: Anoxic injury
Brain_edema_checkbox: Brain edema
Craniectomy_checkbox: Craniectomy
Craniotomy_checkbox: Craniotomy
EDH_checkbox: EDH
EVD_checkbox: EVD
ICH_checkbox: ICH
IVH_checkbox: IVH
Infarct_checkbox: Infarct
Intra_axial_tumor_checkbox: Intra-axial tumor
Menigioma_checkbox: Meningioma
Metal_artifact_checkbox: Metal artifact
Midline_shift_checkbox: Midline shift
Motion_artifact_checkbox: Motion artifact
Multiple_lesions_checkbox: Multiple lesions
Normal_checkbox: Normal
Pressure_monitor_checkbox: Pressure monitor
SAH_checkbox: SAH
SDH_checkbox: SDH
Tonsillar_herniation_checkbox: Tonsillar herniation

comboboxes:
atrophy:
atrophy_mild: Mild
atrophy_moderate: Moderate
atrophy_none: None
atrophy_severe: Severe
test_dd:
'1': '1'
ventricular_size:
ventricular_size_mild: Mild
ventricular_size_moderate: Moderate
ventricular_size_normal: Normal/proportional
ventricular_size_severe: Severe
white_matter_changes:
wmc_mild: Mild
wmc_moderate: Moderate
wmc_none: None
wmc_severe: Severe
ct_window_level: 45
ct_window_width: 85
default_segmentation_directory: ''
default_volume_directory: ''
freetextboxes:
cheese: Cheese
number_of_focal_points: Number of focal points
other_comments: Comments
impose_bids_format: false
input_filetype: '*.nii.gz'
interpolate_value: 0
is_classification_requested: true
is_display_timer_requested: false
is_keyboard_shortcuts_requested: true
is_mouse_shortcuts_requested: true
is_segmentation_requested: true
is_semi_automatic_phe_tool_requested: true
labels:
- color_b: 10
color_g: 10
color_r: 255
lower_bound_HU: 30
name: ICH
upper_bound_HU: 90
value: 1
- color_b: 70
color_g: 230
color_r: 230
lower_bound_HU: 30
name: IVH
upper_bound_HU: 90
value: 2
- color_b: 255
color_g: 80
color_r: 11
lower_bound_HU: 5
name: PHE
upper_bound_HU: 33
value: 3

modality: MRI
slice_view_color: Yellow
14 changes: 0 additions & 14 deletions SlicerCART/src/general_config.yml

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22 changes: 0 additions & 22 deletions SlicerCART/src/keyboard_shortcuts_config.yml

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22 changes: 0 additions & 22 deletions SlicerCART/src/label_config.yml

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2 changes: 0 additions & 2 deletions SlicerCART/src/segmentation_config.yml

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