Merge branch 'dev' into extend_summary

docs/contributing/setup.md

@@ -5,31 +5,6 @@ description: How to contribute to nf-co2footprint
 
 # Getting started with plugin development
 
-## Compiling
-
-To compile and run the tests use the following command:
-
-```bash
-./gradlew check
-```
-
-## Launch without a local Nextflow build
-
-The plugin can be tested prior release without using a local Nextflow build using the following steps:
-
-1. Build the plugin: 
-
-```bash
-make buildPlugins
-```
-
-2. Copy `build/plugins/nf-co2footprint-<version>` to `$HOME/.nextflow/plugins`
-4. Run nextflow with this command:
-
-   ```bash
-   nextflow run -plugins [email protected] <script/pipeline name> [pipeline params]
-   ```
-
 ## Launch it with Nextflow
 
 To test with Nextflow for development purpose:
@@ -59,7 +34,9 @@ To test with Nextflow for development purpose:
    ./launch.sh run -plugins nf-co2footprint <script/pipeline name> [pipeline params]
    ```
 
-## Alternative: Compile and install to Nextflow plugins directory
+## Alternative: Launch without a local Nextflow build
+
+The plugin can be tested without using a local Nextflow build using the following steps:
 
 !!! warning
 
@@ -76,10 +53,19 @@ To test with Nextflow for development purpose:
 2. Run nextflow with this command, specifying the plugin version:
 
    ```bash
-   nextflow run -plugins nf-co2footprint@0.4.0 <script/pipeline name> [pipeline params]
+   nextflow run -plugins nf-co2footprint@0.1.0 <script/pipeline name> [pipeline params]
    ```
 
 
+## Compiling and running tests
+
+To compile and run the tests use the following command:
+
+```bash
+./gradlew check
+```
+
+
 ## Change and preview the docs
 
 The docs are generated using [Material for MkDocs](https://squidfunk.github.io/mkdocs-material/). To change the docs, edit the files in the [docs/](docs/) folder and run the following command to generate the docs (after installing mkdocs via `pip install mkdocs-material`):