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Signed-off-by: Jorge Aguilera <[email protected]>
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38
plugins/nf-nomad/src/main/nextflow/nomad/config/ConstraintAttrSpec.groovy
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,38 @@ | ||
| package nextflow.nomad.config | ||
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| class ConstraintAttrSpec { | ||
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| private String arch = null | ||
| private Integer numcores= null | ||
| private Integer reservablecores= null | ||
| private Double totalcompute= null | ||
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| String getArch() { | ||
| return arch | ||
| } | ||
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| Integer getNumcores() { | ||
| return numcores | ||
| } | ||
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| Integer getReservablecores() { | ||
| return reservablecores | ||
| } | ||
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| Double getTotalcompute() { | ||
| return totalcompute | ||
| } | ||
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| ConstraintAttrSpec setCpu(Map map){ | ||
| cpu(map) | ||
| } | ||
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| ConstraintAttrSpec cpu(Map map){ | ||
| this.arch = map.containsKey("arch") ? map["arch"].toString() : null | ||
| this.numcores = map.containsKey("numcores") ? map["numcores"] as int : null | ||
| this.reservablecores = map.containsKey("reservablecores") ? map["reservablecores"] as int : null | ||
| this.totalcompute = map.containsKey("totalcompute") ? map["totalcompute"] as double : null | ||
| this | ||
| } | ||
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| } |
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97 changes: 97 additions & 0 deletions
97
plugins/nf-nomad/src/main/nextflow/nomad/executor/ConstraintsBuilder.groovy
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,97 @@ | ||
| package nextflow.nomad.executor | ||
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| import io.nomadproject.client.model.Constraint | ||
| import nextflow.nomad.config.ConstraintAttrSpec | ||
| import nextflow.nomad.config.ConstraintNodeSpec | ||
| import nextflow.nomad.config.ConstraintsSpec | ||
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| class ConstraintsBuilder { | ||
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| protected static List<Constraint> constraintsSpecToList(ConstraintsSpec spec){ | ||
| def constraints = [] as List<Constraint> | ||
| if( spec?.nodeSpecs ){ | ||
| def nodes = spec.nodeSpecs | ||
| ?.collect({ nodeConstraints(it)}) | ||
| ?.flatten() as List<Constraint> | ||
| constraints.addAll(nodes) | ||
| } | ||
| if( spec?.attrSpecs ){ | ||
| def nodes = spec.attrSpecs | ||
| ?.collect({ attrConstraints(it)}) | ||
| ?.flatten() as List<Constraint> | ||
| constraints.addAll(nodes) | ||
| } | ||
| return constraints | ||
| } | ||
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| protected static List<Constraint> nodeConstraints(ConstraintNodeSpec nodeSpec){ | ||
| def ret = [] as List<Constraint> | ||
| if( nodeSpec.id ){ | ||
| ret.add new Constraint() | ||
| .ltarget('${node.unique.id}') | ||
| .operand("=") | ||
| .rtarget(nodeSpec.id) | ||
| } | ||
| if( nodeSpec.name ){ | ||
| ret.add new Constraint() | ||
| .ltarget('${node.unique.name}') | ||
| .operand("=") | ||
| .rtarget(nodeSpec.name) | ||
| } | ||
| if( nodeSpec.clientClass ){ | ||
| ret.add new Constraint() | ||
| .ltarget('${node.class}') | ||
| .operand("=") | ||
| .rtarget(nodeSpec.clientClass) | ||
| } | ||
| if( nodeSpec.dataCenter ){ | ||
| ret.add new Constraint() | ||
| .ltarget('${node.datacenter}') | ||
| .operand("=") | ||
| .rtarget(nodeSpec.dataCenter) | ||
| } | ||
| if( nodeSpec.region ){ | ||
| ret.add new Constraint() | ||
| .ltarget('${node.region}') | ||
| .operand("=") | ||
| .rtarget(nodeSpec.region) | ||
| } | ||
| if( nodeSpec.pool ){ | ||
| ret.add new Constraint() | ||
| .ltarget('${node.pool}') | ||
| .operand("=") | ||
| .rtarget(nodeSpec.pool) | ||
| } | ||
| ret | ||
| } | ||
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| protected static List<Constraint> attrConstraints(ConstraintAttrSpec nodeSpec) { | ||
| def ret = [] as List<Constraint> | ||
| if (nodeSpec.arch) { | ||
| ret.add new Constraint() | ||
| .ltarget('${attr.cpu.arch}') | ||
| .operand("=") | ||
| .rtarget(nodeSpec.arch) | ||
| } | ||
| if (nodeSpec.numcores) { | ||
| ret.add new Constraint() | ||
| .ltarget('${attr.cpu.numcores}') | ||
| .operand("=") | ||
| .rtarget("$nodeSpec.numcores") | ||
| } | ||
| if (nodeSpec.reservablecores) { | ||
| ret.add new Constraint() | ||
| .ltarget('${attr.cpu.reservablecores}') | ||
| .operand("=") | ||
| .rtarget("$nodeSpec.reservablecores") | ||
| } | ||
| if (nodeSpec.totalcompute) { | ||
| ret.add new Constraint() | ||
| .ltarget('${attr.cpu.totalcompute}') | ||
| .operand("=") | ||
| .rtarget("$nodeSpec.totalcompute") | ||
| } | ||
| ret | ||
| } | ||
|
|
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| } |
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