Use TSS bed for deeptools with minimum width

nf-core · Nov 21, 2022 · 100c71e · 100c71e
1 parent 0da9660
commit 100c71e
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Showing 2 changed files with 11 additions and 2 deletions.
diff --git a/modules/nf-core/deeptools/computematrix/main.nf b/modules/nf-core/deeptools/computematrix/main.nf
diff --git a/workflows/atacseq.nf b/workflows/atacseq.nf
@@ -370,7 +370,7 @@ workflow ATACSEQ {
         //
         DEEPTOOLS_COMPUTEMATRIX (
             UCSC_BEDGRAPHTOBIGWIG_LIBRARY.out.bigwig,
-            PREPARE_GENOME.out.gene_bed
+            PREPARE_GENOME.out.tss_bed
         )
         ch_versions = ch_versions.mix(DEEPTOOLS_COMPUTEMATRIX.out.versions.first())