Merge pull request #84 from nf-core/fix_download_test

Removing option stub from CI-test of download
nf-core · Mar 13, 2024 · e96b009 · e96b009
2 parents 008854c + 795889b
commit e96b009
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diff --git a/.github/workflows/download_pipeline.yml b/.github/workflows/download_pipeline.yml
@@ -69,4 +69,4 @@ jobs:
         env:
           NXF_SINGULARITY_CACHEDIR: ./
           NXF_SINGULARITY_HOME_MOUNT: true
-        run: nextflow run ./${{ env.REPOTITLE_LOWERCASE }}/$( sed 's/\W/_/g' <<< ${{ env.REPO_BRANCH }}) -stub -profile test,singularity --outdir ./results
+        run: nextflow run ./${{ env.REPOTITLE_LOWERCASE }}/$( sed 's/\W/_/g' <<< ${{ env.REPO_BRANCH }}) -profile test,singularity --outdir ./results
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -9,7 +9,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
 
 - [#73](https://github.com/nf-core/bamtofastq/pull/73) Sync TEMPLATE with tools 2.12
 - [#75](https://github.com/nf-core/bamtofastq/pull/75), [#78](https://github.com/nf-core/bamtofastq/pull/78) Sync TEMPLATE with tools 2.13
-- [#80](https://github.com/nf-core/bamtofastq/pull/80) Sync TEMPLATE with tools 2.13.1
+- [#80](https://github.com/nf-core/bamtofastq/pull/80), [#84](https://github.com/nf-core/bamtofastq/pull/84) Sync TEMPLATE with tools 2.13.1
 
 ### `Changed`