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Important! Template update for nf-core/tools v3.0.2 #35

Merged
merged 21 commits into from
Oct 11, 2024
Merged

Important! Template update for nf-core/tools v3.0.2 #35

merged 21 commits into from
Oct 11, 2024

Commits on Oct 8, 2024

  1. Template update for nf-core/tools version 3.0.0

    @nf-core-bot
    nf-core-bot committed Oct 8, 2024
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Commits on Oct 9, 2024

  1. Template update for nf-core/tools version 3.0.1

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    nf-core-bot committed Oct 9, 2024
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Commits on Oct 11, 2024

  1. Merge branch 'dev' into nf-core-template-merge-3.0.1

    @maxulysse
    maxulysse committed Oct 11, 2024
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  2. update modules and subworkflows

    @maxulysse
    maxulysse committed Oct 11, 2024
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  3. prettier

    @maxulysse
    maxulysse committed Oct 11, 2024
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  4. Include default

    @maxulysse
    maxulysse committed Oct 11, 2024
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  5. shard

    @maxulysse
    maxulysse committed Oct 11, 2024
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  6. refactor tests

    @maxulysse
    maxulysse committed Oct 11, 2024
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  7. update snapshot

    @maxulysse
    maxulysse committed Oct 11, 2024
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  8. Just 4 shards for now

    @maxulysse
    maxulysse committed Oct 11, 2024
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  9. improve mutect2 tests

    @maxulysse
    maxulysse committed Oct 11, 2024
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  10. Template update for nf-core/tools version 3.0.2

    @nf-core-bot
    nf-core-bot committed Oct 11, 2024
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  11. fix gens and germlinecnvcaller tests

    @maxulysse
    maxulysse committed Oct 11, 2024
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  12. fix gens snapshots

    @maxulysse
    maxulysse committed Oct 11, 2024
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  13. fix GHA

    @maxulysse
    maxulysse committed Oct 11, 2024
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  14. fix germlinecnvcaller snapshots

    @maxulysse
    maxulysse committed Oct 11, 2024
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  15. Merge remote-tracking branch 'upstream/nf-core-template-merge-3.0.1' … 

    …into nf-core-template-merge-3.0.2
    @maxulysse
    maxulysse committed Oct 11, 2024
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  16. update CHANGELOG

    @maxulysse
    maxulysse committed Oct 11, 2024
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  17. leftover merge conflicts

    @maxulysse
    maxulysse committed Oct 11, 2024
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  18. Update CHANGELOG.md

    @maxulysse
    maxulysse authored Oct 11, 2024
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  19. Update workflows/createpanelrefs.nf 

    Co-authored-by: Louis LE NEZET <[email protected]>
    @maxulysse @LouisLeNezet
    maxulysse and LouisLeNezet authored Oct 11, 2024
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