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Merge pull request #215 from luslab/dev #561

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Merge pull request #215 from luslab/dev

Merge pull request #215 from luslab/dev #561

Triggered via push October 23, 2023 15:47
@chris-cheshirechris-cheshire
pushed 1798764
dev
Status Success
Total duration 59m 27s
Artifacts –

ci.yml

on: push
Run standard pipeline test (edge version)
7m 48s
Run standard pipeline test (edge version)
Matrix: Run standard pipeline test
Matrix: Run extended pipeline test
Matrix: unit_tests
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123 warnings
23.04.0 test_consensus_peaks_invalid
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_bam_scale_bpm
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_bam_scale_none
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_bam_scale_spikein
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_peak_callers_invalid
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_bam_scale_cpm_iggscale
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_samplesheet_3
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_bam_scale_cpm
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_bam_scale_rpkm
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_skip_fastqc
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_save_ref
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_save_trimmed
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_only_align_end_to_end
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_genome_options
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_filtering_noqfilter
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_samplesheet_2
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_filtering_withqfilter
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_only_align_local
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_save_unaligned
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run standard pipeline test
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_peak_callers_seacr_macs2
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run standard pipeline test (edge version)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_save_spikein_align
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_peak_callers_seacr_macs2_noigg
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_peak_callers_macs2_seacr
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_consensus_peaks_all
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_only_input
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_intermed
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_duplicates_remove
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_consensus_peaks_group
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_duplicates_mark
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run standard pipeline test (23.04.0)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_only_filtering_with_mitochondrial_reads
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_duplicates_remove_target
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_save_merged
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_linear_duplicates_remove_target
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_genome_options_spikein
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_peak_callers_seacr
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_only_filtering_without_mitochondrial_reads_mito_name_null
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_only_filtering_without_mitochondrial_reads
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_skip_trimming
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_consensus_peaks_invalid
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_linear_duplicates_remove
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_peak_callers_invalid
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_align_only_align
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_heatmaps_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_bam_scale_bpm
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_reporting
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_bam_scale_cpm
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_peak_callers_ctrl_tests
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_samplesheet_3
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_bam_scale_cpm_iggscale
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_bam_scale_none
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_only_filtering
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_heatmaps_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_preseq_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_igv_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_bam_scale_rpkm
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_peak_callers_macs2
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_peak_callers_seacr_macs2_noigg
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_multiqc_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_preseq_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_only_align_end_to_end
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_filtering_withqfilter
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_heatmaps_grouped
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_bam_scale_spikein
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_multiqc_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_only_input
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_save_unaligned
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_save_spikein_align
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_igv_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_only_align_local
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_peak_calling_only_peak_calling
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_peak_callers_seacr_macs2
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_genome_options
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_samplesheet_2
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_peak_callers_macs2_seacr
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_peak_qc_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_duplicates_mark
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_consensus_peaks_group
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_linear_duplicates_remove_target
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_consensus_peaks_all
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_only_align
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_intermed
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_filtering_noqfilter
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_duplicates_remove_target
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_linear_duplicates_remove
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run extended pipeline test
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_save_ref
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_align_duplicates_remove
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_only_filtering_without_mitochondrial_reads
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_skip_trimming
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_peak_callers_seacr
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_skip_fastqc
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_only_filtering_without_mitochondrial_reads_mito_name_null
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_save_merged
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_save_trimmed
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_peak_qc_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_only_filtering_with_mitochondrial_reads
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_reporting
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_peak_callers_ctrl_tests
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_genome_options_spikein
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_heatmaps_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_preseq_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_multiqc_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 test_samplesheet
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_peak_calling_only_peak_calling
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run extended pipeline test (23.04.0)
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected]. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_peak_qc_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_peak_qc_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_igv_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_preseq_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_only_filtering
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_heatmaps_grouped
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_multiqc_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_peak_callers_macs2
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_igv_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_heatmaps_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_dtqc_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
23.04.0 verify_output_reporting_skip_dtqc_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
test_samplesheet
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_dtqc_true
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
verify_output_reporting_skip_dtqc_false
The following actions uses node12 which is deprecated and will be forced to run on node16: Wandalen/[email protected], actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/