Dsl2 add sharding of fastqs before alignment #2457

Job	Run time
Run pipeline with test data (23.04.0, -profile test,docker --preprocessing_tool fastp --preproces...	5m 3s
Run pipeline with test data (23.04.0, -profile test,docker --preprocessing_tool adapterremoval --...	5m 0s
Run pipeline with test data (23.04.0, -profile test,docker --mapping_tool bwamem --run_mapdamage_...	13m 44s
Run pipeline with test data (23.04.0, -profile test,docker --mapping_tool bowtie2)	2m 49s
Run pipeline with test data (23.04.0, -profile test,docker --skip_preprocessing)	2m 29s
Run pipeline with test data (23.04.0, -profile test_humanbam,docker --run_mtnucratio --run_contam...	12m 29s
Run pipeline with test data (23.04.0, -profile test_multiref,docker)	16m 26s
Run pipeline with test data (latest-everything, -profile test,docker --preprocessing_tool fastp -...	2m 44s
Run pipeline with test data (latest-everything, -profile test,docker --preprocessing_tool adapter...	4m 30s
Run pipeline with test data (latest-everything, -profile test,docker --mapping_tool bwamem --run_...	15m 11s
Run pipeline with test data (latest-everything, -profile test,docker --mapping_tool bowtie2)	5m 50s
Run pipeline with test data (latest-everything, -profile test,docker --skip_preprocessing)	2m 41s
Run pipeline with test data (latest-everything, -profile test_humanbam,docker --run_mtnucratio --...	12m 6s
Run pipeline with test data (latest-everything, -profile test_multiref,docker)	18m 1s
	1h 59m 3s

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