Code

Handle fasta#266

Code

Merged

jonasscheid merged 8 commits intonf-core:mhc-binding-subworkflownf-core/epitopeprediction:mhc-binding-subworkflowfrom jonasscheid:handle-fastajonasscheid/epitopeprediction:handle-fastaCopy head branch name to clipboardJan 31, 2025

+696-479

Commits

Commits on Jan 31, 2025

• Replace generating peptides from fast with updated module fasta2peptides

  jonasscheid

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  1620a49

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• modernise split_peptides script

  jonasscheid

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  ba61baa

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• clean up modules.config

  jonasscheid

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  b61820f

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• add nf-core csvtk concat module to merge on sample post mhc-binding-prediction

  jonasscheid

  committed
  bc1c2d6

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• add to meta map for simple downstream file handling and adjust in all predictors. Add --wide_format_output option for output

  jonasscheid

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  6a1390f

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• Adjust configs

  jonasscheid

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  93af746

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• allow any peptide col name in fasta2peptides

  jonasscheid

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  8048fbf

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• add wide_format_output

  jonasscheid

  committed
  677fc65

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