Update citations #1371
jasmezzci.yml
on: pull_request
Choose nextflow versions to test against depending on target branch
0s
Matrix: nf-test
Annotations
21 errors and 12 warnings
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test_bakta_profile:
test_bakta_profile#L1
Assertion failed:
19 of 22 assertions failed
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nf-test (latest-everything, test_bakta, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_bakta, docker)
Process completed with exit code 1.
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test_prokka_profile:
test_prokka_profile#L1
Assertion failed:
19 of 22 assertions failed
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nf-test (latest-everything, test_prokka, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_prokka, docker)
Process completed with exit code 1.
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test_profile:
test_profile#L1
Assertion failed:
19 of 22 assertions failed
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nf-test (latest-everything, test, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test, docker)
Process completed with exit code 1.
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test_preannotated_profile:
test_preannotated_profile#L1
Assertion failed:
24 of 28 assertions failed
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test_taxonomy_bakta:
conf/test_taxonomy_bakta.config#L1
Assertion failed:
16 of 17 assertions failed
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nf-test (latest-everything, test_preannotated, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_preannotated, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_taxonomy_bakta, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_taxonomy_bakta, docker)
Process completed with exit code 1.
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test_taxonomy_pyrodigal:
conf/test_taxonomy_pyrodigal.config#L1
Assertion failed:
16 of 17 assertions failed
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nf-test (latest-everything, test_taxonomy_pyrodigal, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_taxonomy_pyrodigal, docker)
Process completed with exit code 1.
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test_taxonomy_prokka:
conf/test_taxonomy_prokka.config#L1
Assertion failed:
16 of 17 assertions failed
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nf-test (latest-everything, test_taxonomy_prokka, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_taxonomy_prokka, docker)
Process completed with exit code 1.
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nf-test (latest-everything, test_nothing, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_bakta, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_prokka, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_bgc_pyrodigal, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_preannotated, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_taxonomy_bakta, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_taxonomy_pyrodigal, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_bgc_prokka, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_taxonomy_prokka, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_bgc_bakta, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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nf-test (latest-everything, test_preannotated_bgc, docker)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v3, nf-core/setup-nextflow@v1, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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