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Pull requests: nf-core/mag

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Pull requests list

897 generate snapshot for test default
#909 opened Nov 3, 2025 by brovolia Loading…
11 tasks
Snapshot for -profile test_single_end
#908 opened Oct 31, 2025 by dialvarezs • Draft
11 tasks
1
Snapshot for -profile test_assembly_input
#905 opened Oct 28, 2025 by dialvarezs Loading…
11 tasks
1
3
Create comprehensive snapshot for -profile test
#904 opened Oct 28, 2025 by brovolia Loading…
11 tasks
1
Fix POOL_SHORT_READS receiving reads in wrong roder resulting in faulty pooling
#894 opened Oct 25, 2025 by jfy133 Loading…
11 tasks
18
add MetaBinner
#881 opened Oct 16, 2025 by d4straub Loading…
5 of 11 tasks
40
BIgMAG compatibility
#861 opened Sep 17, 2025 by jeffe107 Loading…
5 tasks
30
Migrate to official nf-core bowtie2 modules + use hostile for host removal
#857 opened Aug 28, 2025 by dialvarezs • Draft
11 tasks
Add pydamage results to binqc table
#835 opened Jun 22, 2025 by jfy133 • Draft
11 tasks
1
4
Replace Bowtie2 custom modules with official nf-core ones
#754 opened Jan 24, 2025 by jfy133 • Draft
1 of 15 tasks
5
Add support for generating taxprofiler/funcscan input samplesheets for preprocessed FASTQs/FASTAs
#688 opened Oct 10, 2024 by vagkaratzas • Draft
1 of 11 tasks
1
24
Added ability to auto-create samplesheet for nf-core/phageannotator enhancement New feature or request ready to review
#543 opened Nov 20, 2023 by CarsonJM • Draft
7 of 10 tasks
@CarsonJM
32
ProTip! Exclude everything labeled bug with -label:bug.