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Fix docker container permissions for ms2rescore #1088

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Fix docker container permissions for ms2rescore

Fix docker container permissions for ms2rescore #1088

Re-run triggered January 23, 2024 15:22
@jonasscheidjonasscheid
#302
jonasscheid:fix-docker-permissions
Status Failure
Total duration 5m 31s
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ci.yml

on: pull_request
Matrix: Run profile tests
Matrix: Run pipeline with test data
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5 errors and 8 warnings
Run pipeline with test data (latest-everything)
Process completed with exit code 1.
Run pipeline with test data (23.04.0)
The operation was canceled.
Run profile tests (test_ionannotator)
Process completed with exit code 1.
Run profile tests (test_percolator)
Process completed with exit code 1.
Run profile tests (test_mokapot)
The operation was canceled.
Run pipeline with test data (latest-everything)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (23.04.0)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run profile tests (test_ionannotator)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run profile tests (test_ionannotator)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run profile tests (test_percolator)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run profile tests (test_percolator)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run profile tests (test_mokapot)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run profile tests (test_mokapot)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/