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Important! Template update for nf-core/tools v2.13.1 #143

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Important! Template update for nf-core/tools v2.13.1

Important! Template update for nf-core/tools v2.13.1 #143

Triggered via pull request March 15, 2024 07:07
@a4000a4000
synchronize #36
nf-core-template-merge-2.13.1
Status Cancelled
Total duration 9m 17s
Artifacts –

ci.yml

on: pull_request
Check for changes
4s
Check for changes
Choose nextflow versions to test against depending on target branch
0s
Choose nextflow versions to test against depending on target branch
Matrix: test
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16 errors and 17 warnings
subworkflows/utils_nfcore_pipeline docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
readsimulator_test_amplicon docker NF latest-everything
Process completed with exit code 1.
readsimulator_test_amplicon docker NF latest-everything
Process completed with exit code 1.
readsimulator_test_amplicon docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/utils_nfvalidation_plugin docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
multiqc docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
readsimulator_test_wholegenome docker NF latest-everything
Process completed with exit code 1.
readsimulator_test_wholegenome docker NF latest-everything
Process completed with exit code 1.
readsimulator_test_wholegenome docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/utils_nextflow_pipeline docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
readsimulator_test_target_capture docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
readsimulator_test_target_capture docker NF latest-everything
Process completed with exit code 1.
readsimulator_test_target_capture docker NF latest-everything
Process completed with exit code 1.
readsimulator_test_metagenome docker NF latest-everything
Process completed with exit code 1.
readsimulator_test_metagenome docker NF latest-everything
Process completed with exit code 1.
readsimulator_test_metagenome docker NF latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Check for changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, dorny/paths-filter@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/utils_nfcore_pipeline docker NF latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/utils_nfcore_pipeline docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
readsimulator_test_amplicon docker NF latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
readsimulator_test_amplicon docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/utils_nfvalidation_plugin docker NF latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/utils_nfvalidation_plugin docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
multiqc docker NF latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
multiqc docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
readsimulator_test_wholegenome docker NF latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
readsimulator_test_wholegenome docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/utils_nextflow_pipeline docker NF latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/utils_nextflow_pipeline docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
readsimulator_test_target_capture docker NF latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
readsimulator_test_target_capture docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
readsimulator_test_metagenome docker NF latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
readsimulator_test_metagenome docker NF latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23