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RC 3.16.0 #3009

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RC 3.16.0

RC 3.16.0 #3009

Re-run triggered October 2, 2024 12:13
@maxulyssemaxulysse
#1395
dev
Status Cancelled
Total duration 11m 2s
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2 errors and 36 warnings
tests/hisat2.nf.test docker NF-23.04
Canceling since a higher priority waiting request for 'nf-core CI-1395' exists
tests/hisat2.nf.test docker NF-latest-everything
Canceling since a higher priority waiting request for 'nf-core CI-1395' exists
modules/nf-core/bracken/bracken/tests/main.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/star_rsem.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/skip_trimming.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_align_hisat2/tests/main.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/salmon.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/default.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/kraken2/kraken2/tests/main.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/min_mapped_reads.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/remove_ribo_rna.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/bedtools/genomecov/tests/main.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialistion.workflow.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/featurecounts_group_type.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/hisat2/align/tests/main.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/skip_qc.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/align_star/tests/main.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/bracken/bracken/tests/main.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/kallisto.nf.test docker NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/skip_trimming.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/nf-core/fastq_align_hisat2/tests/main.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/default.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/star_rsem.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/min_mapped_reads.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/remove_ribo_rna.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/kraken2/kraken2/tests/main.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/salmon.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/hisat2/align/tests/main.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialistion.workflow.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
modules/nf-core/bedtools/genomecov/tests/main.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
subworkflows/local/align_star/tests/main.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/featurecounts_group_type.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/kallisto.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
tests/skip_qc.nf.test docker NF-23.04
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4, mikepenz/action-junit-report@v3. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/