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Use channel topic for tool versions #2081

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Use channel topic for tool versions

Use channel topic for tool versions #2081

Run time

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Job Run time
Test Pseudoaligners with workflow parameters (--pseudo_aligner salmon --skip_qc)
17s
Test HISAT2 with workflow parameters (--skip_qc)
1m 57s
Test STAR RSEM with workflow parameters (--skip_qc)
17s
Test Pseudoaligners with workflow parameters (--pseudo_aligner salmon --skip_alignment --skip_pse...
21s
Test HISAT2 with workflow parameters (--hisat2_index false)
17s
Test STAR RSEM with workflow parameters (--rsem_index false)
22s
Test Pseudoaligners with workflow parameters (--pseudo_aligner salmon --salmon_index false --tran...
25s
Test Pseudoaligners with workflow parameters (--pseudo_aligner kallisto --skip_qc)
21s
Test Pseudoaligners with workflow parameters (--pseudo_aligner kallisto --skip_alignment --skip_p...
22s
Test STAR Salmon with workflow parameters (--skip_qc)
20s
Test Pseudoaligners with workflow parameters (--pseudo_aligner kallisto --kallisto_index false --...
15s
Run pipeline with test data (23.11.0-edge)
10m 59s
Test STAR Salmon with workflow parameters (--skip_trimming)
19s
Run pipeline with test data (latest-everything)
10m 43s
Test STAR Salmon with workflow parameters (--gtf false)
22s
Test STAR Salmon with workflow parameters (--star_index false)
17s
Test STAR Salmon with workflow parameters (--transcript_fasta false)
18s
Test STAR Salmon with workflow parameters (--min_mapped_reads 90)
17s
Test STAR Salmon with workflow parameters (--with_umi)
17s
Test STAR Salmon with workflow parameters (--with_umi --skip_trimming)
17s
Test STAR Salmon with workflow parameters (--remove_ribo_rna --skip_qualimap)
23s
Test STAR Salmon with workflow parameters (--bam_csi_index)
23s
Test STAR Salmon with workflow parameters (--save_align_intermeds --save_reference)
20s
Test STAR Salmon with workflow parameters (--featurecounts_group_type false)
16s
Test STAR Salmon with workflow parameters (--trimmer fastp)
17s
30m 42s